Mastomys coucha (southern multimammate mouse): 116099485
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Entry
116099485 CDS
T07224
Symbol
Dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116099485 (Dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116099485 (Dcp1b)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116099485 (Dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
116099485 (Dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
116099485
NCBI-ProteinID:
XP_031239018
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MASAAAGGLPGKGHNISLAALRRHDPYISRIVDVASQVALYTFGHRANEWEKTGVEGTLF
VYTRSVSPKHGFTIMNRLSMENRTEPITTDLDFQLQDPFLLYRNGTLAIYGIWFYDKEEC
QRIANLMKNLTQCEQLKACHGAGAGAGAGSFPITPSSGESQEVDILQMLTKAKDEYTKCK
TCSEPKQMTSSSAICDNPKLIKPVPVRPSSSQRLQEPMPSKTLDPEPQHLSLTALFGKQD
KAPCQETVRPSRTFVHHHHHHYHHQQQQQEKLPVHHGVACSLSCEEPRKLSLPVEKQLCP
AIQKLMVGSTGLYPLPQHPEQWPCETGGPSPAGGILSGPVQLGSPWNVKAAHCTQSTCRS
HKLLEQLQGAPAAVHKYNPCAPAGPAVATQVVPGQSVAQSQLVYFSGPLPPPAPGHQALR
KEQGELPAHVVSLSSSQESSPTVLPTQELLRKLQVVHQEQQVAPRPALAARFPVSAQGSG
TEKPLEAWVSKTASMEKQAPLLQTVSSQCVPAAVASLLMPPVVFTQSTCAPLRETDNGLM
ALGGQELPAASSSLLLPLQNWESSTVASRPLTRLQLQEALLNLIQVRLLMYSQHQGKLSC
LDAGLSRVPPPPPTASKLS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggcggcaggtggcctgcctgggaaggggcacaatatcagcctggcagcc
ctgcggcgccacgacccctacatcagtcgcatcgtggacgtggccagccaggtggctctg
tacactttcggccatcgggccaacgagtgggagaagactggcgtggaaggaaccctattt
gtttatacaaggtctgtctctccaaagcacggattcaccattatgaataggctcagcatg
gaaaaccgaacagaacccattactacagacctagacttccaactccaggaccctttcctt
ctctacagaaatggcacactggccatttatggaatttggttttatgataaggaagagtgc
cagagaattgcaaacctaatgaaaaacctcactcagtgcgaacagttgaaagcctgccat
ggtgctggagccggggctggagctggatccttcccaataaccccgagttcaggagagagc
caagaagtagacatcctacagatgcttaccaaagccaaggatgagtacaccaagtgtaag
acctgttctgagccaaaacagatgaccagttcttctgccatctgtgacaaccctaaactt
atcaaacctgtccccgtgagacccagcagcagccagaggctacaggaacccatgcccagc
aagaccctggaccctgagcctcaacacttatctttgacagcgctatttgggaaacaagac
aaagctccctgtcaggaaactgtgagaccctcccggacctttgtccaccaccatcaccat
cactaccaccaccagcagcagcagcaagagaagcttccagttcatcatggagttgcatgc
tccctatcctgtgaggagcccagaaagctctcactccctgtggagaagcagctatgccca
gccattcagaaactcatggtcgggagcacggggctatacccactgccacagcaccctgaa
cagtggccctgcgaaactggtggccccagtcctgcagggggaattctttccggtcctgtc
cagctggggtccccctggaatgttaaagctgcacactgcacacagagtacttgcagaagc
cacaagctattagagcagcttcaaggggcccctgcggcagtgcataagtataacccctgt
gcgcctgccggtccagctgtggccactcaggtggttccaggccagagtgtggcccagtca
cagctggtatatttcagtggcccccttccacctcctgcaccaggacaccaagctctcagg
aaggagcagggtgaactaccagcacatgtggtgtcactctctagcagccaggagagcagc
cccactgtgctccctactcaggagctgctaaggaagctccaggtagtacaccaggagcaa
caggtggccccccggccagccttggcagccaggttccctgtgtcagcccagggatcaggg
acagaaaagcccttggaagcctgggtcagcaagacagccagcatggaaaaacaggctcct
cttctgcagaccgtctcatctcagtgtgtccctgctgcagtggcttctctgctcatgccc
cctgtggttttcacgcagtctacctgtgccccactgagggagactgataatgggctcatg
gccctaggaggccaagaacttcctgctgcctcctccagcctcctcctgcccctgcagaac
tgggagtcctccaccgtggccagcaggcccctcaccaggctgcagctccaggaagcactg
ctgaacctcatccaggtaagactgttgatgtacagtcagcaccagggcaagctgagctgt
ctggatgctggactctctagagtgccaccacctcccccaacagcttctaaactcagttaa
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integrated database retrieval system
