Mastomys coucha (southern multimammate mouse): 116099486
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Entry
116099486 CDS
T07224
Symbol
Ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116099486 (Ppfia4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116099486 (Ppfia4)
Membrane trafficking [BR:
mcoc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116099486 (Ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
116099486
NCBI-ProteinID:
XP_031239027
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MCEVMPTINEGDPLGPPHGADADANFEQLMVNMLDEREKLLESLRESQETLVATQSRLQD
ALHERDQLQRHLNSALPQEFATLTRELSMCREQLLEREEEISELKAERNNTRLLLEHLEC
LVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAALERVT
TLEEQLAGAHQQVSALQQGAGIRDGVAEEEGTVDLGPKRLWKDDTGRVEELQGLLEKQNY
ELSQARERLVTLSATVTELEEDLGTARRDLIKSEELSSKHQRDLREALAQKEDMEERITT
LEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVAEQKLQQTMRK
AETLPEVEAELSQRIAALTKAEERHGNIEEHLRQLEGQLEEKNQELARVRQREKMNEDHN
KRLSDTVDRLLSESNERLQLHLKERMAALEEKGRLSEEIEKLRQEVDQLKGRGGPFVDGI
HSRSHVGSAADVRFSLSTATHVPPGLHRRYSALRDESAKDWKPSPLPGVLATATTTPAFD
SDPEISDVDEDEPGGLVGTQVDVISPGGHSDAQTLAMMLQEQLDAINQEIRMIQEEKEST
ELRAEEIETRVTSGSMEALNLTQLRKRGSIPTSLTALSLASASPPLSGRSTPKLTSRSAA
QDLDRMGVMTLPSDLRKHRRKLLSPVSREENREDKATIKCETSPPSSPRTLRLEKLGHPA
LSQEESKSALEGQDSNPSSSNSSQDSLHKGAKRKGIKSSIGRLFGKKEKGRLIQLSRDAT
GHVLLTDSELSLQEPMVPAKLGTQAEKDRRLKKKHQLLEDARRKGMPFAQWDGPTVVSWL
ELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRLKLRLAIQEMVSLTSP
SAPPTSRTSSGNVWVTHEEMETLATSTKTDSDEGSWAQTLAYGDMNHEWIGNEWLPSLGL
PQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMCLKRLNYDRKELEKR
REESQHEIKDVLVWTNDQVVHWVQSIGLRDYAGNLHESGVHGALLALDENFDHNTLALVL
QIPTQNTQARQVMEREFNNLLALGTDRKLDDGEEKVFRRAPSWRKRFRPRDHHSGGMLGT
SAETLPAGFRVSTLGPLQPPPAPPKKIMPEAHSHYLYGHMLSAFRD
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggtgatgcccacaatcaatgagggggaccctctggggcccccccatggtgcc
gatgcggacgccaactttgagcagctgatggtgaacatgctggatgagcgagagaagttg
ctggagtccctccgggagagtcaggaaactttggtagccacacagagccggctccaggac
gcccttcatgagcgagaccagctccagcgccacctgaactccgccctcccccaggaattt
gccactttaactcgggagctaagcatgtgccgggagcaacttctggagcgggaggaagag
atatctgagctgaaagcagaacggaataacacaaggttgcttctggaacatctggaatgc
cttgtgtcccgccatgagcggtctttgcggatgacagtggtaaaacggcaggcccagtca
ccttcaggtgtctccagtgaggtggaggtgctgaaggccctcaagtccttatttgagcac
cacaaggccctggatgagaaggttcgagagcgactccgggcagctctagagcgtgttact
accttggaggagcagttggcaggagctcatcagcaggtatctgccctgcagcagggggca
ggaattcgggatggagtggcagaagaggaagggactgtggatctgggaccaaaacgcctg
tggaaggatgacactggccgggtggaagagctacaaggactcttggagaagcaaaactat
gagttgagccaggcccgagagcggctggtcactctgagtgccaccgtgactgagcttgag
gaggacctgggcacagcccgcagagacctcatcaagtcagaagagctgagcagcaagcat
cagcgggacctccgagaggctctggcgcagaaggaggacatggaagagcgaatcaccaca
ctggagaagcgctacttggctgctcagcgagaggccacttccatccatgacctcaatgac
aaactggagaatgagctggccaacaaggagtccctgcaccgccagtgcgaggagaaagcc
cgacatctgcaggagctgctggaagtggcagagcagaagctacagcagaccatgcgcaag
gcagagactctgccagaggtggaggctgagctgtctcagagaattgccgccctcaccaag
gctgaggaacgtcatggcaacattgaggaacatctacggcagctggaagggcagctggag
gagaagaaccaggagctggcaagggtgcgccagcgggagaagatgaacgaagaccacaac
aagcggctgtcagacaccgtggaccggttgcttagtgagtccaacgagcgcctacagctc
cacctcaaggagcgaatggccgccctggaggagaagggccgtctgtctgaagagattgag
aagctgcgccaagaggtggaccagctgaagggtcgaggggggccgtttgtggatggcatc
cactccaggtcacacgtgggcagtgcagcagatgtgcggttctcactgagtacagccacg
cacgtgcccccaggtctgcatcgccgctattcggcgctgagggatgagtcggccaaggac
tggaagccatctccattgccaggggtgttggccactgccaccaccacgcctgcctttgac
agtgaccctgagatctcggatgtggacgaggatgagcctgggggcttggtgggcactcag
gttgatgtcatctcacctggtggccattcggatgctcagaccctggccatgatgctgcag
gagcagctggatgccatcaaccaggagatcaggatgatccaggaggagaaggagtccact
gagcttcgtgctgaggagattgagacccgcgtgaccagcggcagcatggaggccctcaat
ctgacccagctgcgcaagcgcggctctatccccacctctctgaccgccctgtccctggcc
agtgcgtctccaccgctcagtggccgctccacacccaagctcacttcccgaagcgctgcc
caggatctggaccgaatgggggtcatgaccctgcccagcgacttaagaaagcataggagg
aagctgctgtcgccagtgtctcgggaagagaaccgagaggataaagccaccataaaatgt
gagacttctcctccttcctcacccaggacgctgcggctagagaagcttggccacccagcc
ctgagtcaagaagaaagcaagagtgccttggagggtcaggacagcaaccccagcagcagc
aacagcagccaggactccctgcacaagggcgccaagcgcaagggcatcaagtcatccatc
ggccgcctgtttgggaagaaggagaagggcaggctgattcagctgagtcgggatgccacg
ggccatgttctgctcacagactcggagctcagtctgcaggaaccaatggtacctgccaag
ttggggacccaggcagagaaggaccggcgactgaaaaagaaacaccagctgcttgaagat
gctcgccgaaaaggaatgccctttgcccaatgggatggccccacggtggtctcctggctg
gagctctgggtggggatgcctgcctggtatgtggcagcctgtcgggccaatgtcaagagt
ggcgccatcatgtcagctctgtcggacaccgagatccagcgggagatcggcatcagcaat
gctctgcacaggctcaagctccgcctggccatccaggagatggtgtccctgacaagcccc
tcagctccccctacctccaggacgtcttcagggaatgtctgggtgacccacgaagagatg
gaaaccctggcaacatctaccaaaacagacagtgatgagggcagctgggcccagaccctg
gcctatggagacatgaatcacgaatggattggaaatgaatggctgcccagcctggggctc
ccccagtaccgcagttacttcatggagtgcctggtggatgcacgcatgctggatcacctc
accaagaaggacctgcgtgtccacctcaagatggtggacagtttccatagaaccagcctt
cagtatggcatcatgtgtctgaagaggctgaattatgaccggaaggagctggagaagagg
cgggaagagagccagcatgagatcaaggatgtgctggtctggaccaacgaccaggtggtt
cactgggtccagtctatagggctaagagactatgcgggaaacctgcatgagagtggcgtg
catggtgccctgctggctctggatgagaacttcgaccacaacacactggccttggttctg
cagatccccacacagaacacccaggcccgccaagtgatggagagagagttcaataacctg
ttggccttgggcacagacaggaaattggatgacggggaagagaaggtgttccgccgagca
ccctcctggaggaaacgcttccggcctcgggatcaccacagtggtggcatgttgggcacc
tcagcggagaccctcccggcgggcttccgcgtgtccacgctgggtccgctgcagcctcca
cctgccccgcccaagaagatcatgccggaagctcactcccactatctctacggacacatg
ctctccgccttccgggactag
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integrated database retrieval system
