Mastomys coucha (southern multimammate mouse): 116099530
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Entry
116099530 CDS
T07224
Symbol
Slc6a12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04082
Neuroactive ligand signaling
mcoc04721
Synaptic vesicle cycle
mcoc04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116099530 (Slc6a12)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116099530 (Slc6a12)
04721 Synaptic vesicle cycle
116099530 (Slc6a12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116099530 (Slc6a12)
Transporters [BR:
mcoc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116099530 (Slc6a12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116099530
NCBI-ProteinID:
XP_031239143
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MDRKVAVHEDGYPVVSWVPEEGEMMDQKGKDQVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYSSQGSVTAWRKICPLLQGIGM
ASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCTNSWNTEHCVDFLNHSSARAVSY
SENFTSPVMEFWERRVLGITSGIHDLGSLRWELALCLLLAWIICYFCIWKGVKSTGKVVY
FTATFPYLMLIILLIRGVTLPGAYQGIIFYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDSIALCFLNSATSFMAGFVVFSILGFMAQEQGIPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLLFLGLDSQFVCMECLVTASMDLFPQQLRKRGR
RELLILAVTIVCYLMGLLLVTEGGMYIFQLFDYYASSGICLLFLSLFEVICIGWVYGADR
FYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFFFSLSKYTPLKYNNVYIYPSWGYSIGW
LLAFSSMACVPLFIIITLLKTQGSFKKRLQRLITPDPSLPQPGRHAPQDGSSAQNCLPSP
AKQELIAWEKETHL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaggttgcagtccatgaagatgggtatcctgtggtttcttgggtccctgag
gaaggggagatgatggaccagaaaggcaaggaccaggtgaaggatcgaggccaatggacc
aacaagatggagtttgtgctgtcagtggctggggagatcattgggctaggcaatgtctgg
aggtttccctatctctgctacaaaaacggaggtggagctttcttcatcccctacttcatc
ttcttctttagctgtggcatcccagtgttcttcctggaggtggcactgggccagtatagc
agccaggggagtgttactgcttggaggaagatctgtcccctccttcaaggcattggcatg
gcctctgtggtcatcgagtcttatttgaacatctactacatcatcatcctcgcctgggct
ctcttctacttgttcagctccttcacctgggagcttccatggacaacctgcaccaactct
tggaacacagagcattgcgtggactttctgaatcactcttcggccagggcagtgagctac
tctgagaacttcacctcacccgtcatggaattctgggagagacgggttttaggtattaca
tctggcatccacgacctggggtccctgcgttgggagttggccttgtgcctcctgctcgcc
tggatcatctgctacttctgcatctggaagggggtcaagtctacaggcaaggttgtttac
tttacagccacttttccctacctgatgttgattattctcctgatccggggtgttaccctt
cctggagcctaccagggcatcatcttctacctgaagccagacttgctccgtctcaaagat
ccccaggtgtggatggatgctggcacccagatcttcttctcctttgccatctgccagggg
tgcctgacagccctgggcagctacaacaagtaccacaacaactgctacagggactccatt
gccctctgcttcctgaacagtgctaccagcttcatggctgggtttgttgttttctccatc
ctgggcttcatggcccaggagcagggaatacccatttctgaagtggctgagtcaggtcct
ggactggccttcattgccttccccaaagcagtgacgatgatgcctttatcccagctgtgg
tcctgcctcttcttcatcatgctcctatttctaggactggacagccagttcgtctgtatg
gagtgcctggtgactgcttccatggacttgtttccccagcagctccgaaagcgtggccgg
cgggagctgctgatcctggcggttaccattgtgtgctacttgatggggctccttctggtc
actgagggtgggatgtatatcttccagctctttgactactacgcctccagcggcatatgc
ctcctcttcctctccttgtttgaggtgatctgcatcggctgggtgtacggggcggaccgt
ttctatgacaacgtggaggacatgattggctatcggccatggcctttggtgaagatctcc
tggctcttcctgacccctggtctttgcctggccaccttcttcttctccttgagcaagtac
acacctctcaagtacaacaatgtctacatatacccttcttggggatactccattggatgg
ctcttggctttttcctccatggcctgtgtcccactctttatcatcatcaccctcctgaag
acgcagggctccttcaagaagcgccttcaaagactcatcacgccggaccccagtctgccc
cagccagggcggcacgcaccacaggatggctcctctgctcaaaactgtttgccctctcca
gccaagcaagaactcattgcctgggagaaggagactcatttgtag
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