Mastomys coucha (southern multimammate mouse): 116099569
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Entry
116099569 CDS
T07224
Symbol
Emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116099569 (Emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116099569 (Emg1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
116099569 (Emg1)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
90S particles
Other 90S particles
116099569 (Emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
116099569
NCBI-ProteinID:
XP_031239208
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
MAATSGGFQPRERRFSVQDQDWDTAPPKRPRLGVGSKCGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSV
EDVSDIRELVPSSDPVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVTTAFEEV
WGII
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaccagtggtggcttccaacctcgtgagcgacgtttttcggtgcaggaccag
gactgggacactgcgccgcctaagaggccccggctgggtgtaggaagcaagtgcggaggc
cgtaggctcattgtggtgttggaaggggccagtctggagacagtcaaggtagggaaaact
tatgagctcctcaactgcgacaagcacaagtccatgctgttgaagaatggacgggaccca
ggggaagtcaggccagacatcacccaccagagcttgctgatgctcatggacagccccctg
aaccgagctggcttgctacaggtttatatccacacacagaagaacgtgctgattgaagtg
aacccccagactcgaatccctagaacctttgaccgattttgtggtctcatggttcagctt
ttacacaaactgagtgttcgagcagctgacggccctcagaagcttttgaaggtaattaag
aatccagtgtccgaccacttcccagttggctgtatgaaaattggcacttccttttctgtt
gaagacgtcagtgatattcgagagttggtgcccagtagtgacccagttgttttcgtggtg
ggggcctttgcccatggcaaggtcagtgtggagtacacagaaaagatggtgtccatcagc
aactatccactctctgctgcgcttacctgtgctaaagttaccacagcttttgaagaagta
tggggcatcatttga
DBGET
integrated database retrieval system
