Mastomys coucha (southern multimammate mouse): 116099830
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Entry
116099830 CDS
T07224
Symbol
Caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116099830 (Caprin2)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116099830 (Caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
116099830
NCBI-ProteinID:
XP_031239818
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MKSAKSQVNHNQQGENQRAPSPLQSTLSSAASPSQAYETYIDNGLICLKHKIRNIEKKKL
KLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEFAKELQKTFSALSQDLLKAQKKAQRR
EHMLKLEAEKKKLRTILQIQYVLQNLTQEHVQKDFKGGLNGAMYLPSKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHVKDLLSKLLHSGYFESVPVLR
NSKEKAEEMLMQSEKKKQLLKTESIKESESLMELVQPEIQPQEFLNRRYMTEVKFSRKQE
NVEQSWEADYARKPSPLKCWNALPEPDGQEKKKEALESWESSLKSQEVSKPVVSLEQGKL
RPTLQEEQKQQASVAPVSQWKPESPKSKVGSPQEEQHVQEAPKAWVAQSQKEQDPKKLRP
GSWAVSVQSEQSGSRSWTTSVCRDQASVQPGTPVSWENNAENQKHSLVPQSQISLKSWGA
ASAGLLPNDQVLPRKINVEPKDVPKPMPQPIDSSSAFPKDPVLRKEKLQDLMTQIQGTCN
FMQESVLDFDKPSSAIPSSQLPSASPVSTVSAEQNLSNQSDFLQEPSQVSSPVTCSSNAC
LVTTDQASSGSETEFMISETPEMVIPPCKPASALASPNPSLSKSFQLPPASGSSAVISTA
PFQAMQTVFNVNAPLPPRQEQEMKEYPYSSAYNQNFTSSSTQTVSQCQLPAVHIEQTTQL
PETAAGYHPDGTVHISNGSLAFYPAPASMFPRPAQPLISSRGALRGCSRGGRLLMNPYRS
PGGYKGFGSYRGLPSVSSGNYSQLQLQTREYPETAYSQRDNFQQCYKRSGTSSGLQANSR
AGWSDSSQVSSPERDSETFNSGDSGLGDSRSMTPVDVPVTSPAAAILPVHIYPLPQQMRV
AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQFGRFSCPVNGTYVFIFHMLKLAVNV
PLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLLQGDQIWLRLHRGAIYGSSWKYST
FSGYLLYQD
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagccaagtcccaagtgaaccacaatcagcaaggggaaaaccagcgggctccg
agccccctgcagtctactctcagttctgctgcatctccttcccaggcatacgaaacctat
attgataatggacttatatgccttaaacacaaaattaggaacatcgagaagaaaaagctc
aaactggaggattataaagatcgcctaaaaaatggagagcagctcaacccagaccagttg
gaagcagtggaaaagtatgaagaagtacttcataatttggaatttgccaaggagcttcag
aaaactttttctgcactgagccaagatcttctgaaagcgcagaaaaaggcccagagaagg
gagcacatgctaaaacttgaggctgagaagaaaaagcttcgaactatacttcaaattcag
tatgtactacagaacttgacacaagaacatgtacaaaaagacttcaaaggaggcttgaat
ggtgcaatgtatttgccttcaaaagaacttgactacctcattaaattctcaaaactgacc
tgccctgaaagaaatgaaagtctgagtgttgaagaccagatggagcagtcatctttatac
ttttgggaccttttggaaggtagtgagaaagcagtggtaggaacaacatacaaacatgtg
aaagacctgctgtctaaattgctgcactcaggttattttgaaagtgtcccagttctcagg
aattctaaggaaaaagcggaagaaatgctaatgcaatcagaaaagaaaaaacagttactg
aagaccgagtctatcaaagagtcagaatctcttatggaacttgtacagccagagatacag
ccacaggagtttcttaacagacgctatatgacagaagtaaaattttcaagaaaacaagaa
aatgtagaacaatcctgggaagcagattatgctaggaaaccaagtcccctcaaatgctgg
aatgcacttccagagccagatggtcaggagaagaagaaagaggccttggagtcctgggag
tcttctcttaagtctcaggaggtatcaaagcctgtggtttccttagaacaggggaagctc
aggccaacattgcaggaagagcagaagcaacaggcttctgtagcacctgtcagtcagtgg
aagccagaaagccctaagtccaaagtgggcagccctcaagaagagcagcatgtacaggag
gcaccaaaggcatgggtggctcagtcacagaaagaacaagatccaaagaagctacgtcct
ggatcctgggcagtatcagttcagagtgaacagagtggcagcagatcctggaccacttct
gtgtgcagagatcaggcttcagtgcagcctggaactccagtatcctgggagaacaatgct
gagaaccagaaacactccttagtcccacaatcacagatttctctaaagtcctggggagca
gcttcagcaggtctcttaccaaatgaccaggtcctacccaggaagataaatgtagaaccc
aaagatgtacctaagcccatgcctcagcctatagactcttcctctgcctttccaaaggat
ccagtattgaggaaagaaaaactgcaagacctcatgacccagattcaaggaacttgtaac
tttatgcaagagtctgttctagattttgacaaaccctcaagtgcaattccatcatcacag
ctgccttcagcttctccagtctctacagtatctgcagaacaaaacttgtccaaccaaagt
gattttcttcaagaaccatcacaggtttcttctccggttacttgtagctcaaatgcttgc
ttggttactactgatcaggcttcttcggggtctgaaacagagtttatgatctcagagacc
cctgagatggtgattcccccctgcaagccagcatctgcacttgcttctccaaatccttcc
ctgtcaaagagcttccagttacctcctgcaagtgggagctcagcagtcattagcacagca
ccctttcaggccatgcagacagtgtttaatgttaatgcacctctgcctccacggcaagaa
caagaaatgaaagaatatccttattcatctgcctacaatcaaaattttacttcatcaagt
acacagacagtatcccaatgccagctcccagccgtacatatagaacagacaacccaactt
ccagagactgctgcaggttaccatcctgatggaactgttcacataagcaatggcagcctt
gccttttacccagcacccgcgagtatgtttcccagacctgctcagccattgatcagtagt
cggggggctctgagagggtgttcccgtggagggaggttactaatgaatccctatcggtct
cctggtggctacaaaggttttggtagttacagaggacttccttcagtttcaagtgggaat
tatagccaactgcagctgcaaactagagaatatcctgaaacagcttactctcaaagggat
aatttccaacagtgttataaaagatcagggacatctagtggtcttcaggcaaattcaaga
gcagggtggagcgactcctctcaggtgagcagcccagaaagagacagcgagacttttaac
agtggagactctgggctaggcgactctcggagcatgactccagtggatgtaccagtgaca
agcccagctgctgccattctgccagtacacatctatcccctgcctcaacaaatgcgagtt
gccttctcagctgccagaacatctaatctggctcctggaactttagaccaacctattgtg
tttgatcttctcctgaacaacttgggagagacatttgatcttcagtttggtagattcagt
tgcccagtaaatggcacttacgtgttcatttttcacatgctaaagctggctgtgaatgta
ccgctgtatgtcaacctcatgaagaatgaggaggtcttggtgtcagcctatgccaatgat
ggtgctccagaccatgagacagcaagcaaccatgccattctacagctcctccagggagac
cagatatggttgcgcttacacaggggagcaatttatggaagtagctggaaatactctaca
ttttcaggctatcttctttatcaagattaa
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