Mastomys coucha (southern multimammate mouse): 116099864
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Entry
116099864 CDS
T07224
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116099864 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116099864 (Smarcad1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116099864 (Smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
116099864
NCBI-ProteinID:
XP_031239875
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MNLFNLDRFRFEKRIKIEEAPEAAPQPSQPGPSSPISISAEEENAEGEVSRANTPDSDVT
EKTEDSSVPEPPDNERKASLSCFQNQRAIQEYIDLSSDSEDVSPNCSSTVQEEKFSKDTV
IIVSEPSEDEESHDLPSVTRKNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLKLI
ESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEEDEVNDDQSLKKPRGERGEESNESAE
ASNNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDVQCASQS
EVTNGKEVSRNKNYSKNAAKIKMKQKISMKPQNGFNKKRKKNVFNPKKAVEDSEYDSGSD
AGSSLDEDYSSCEEVMEDGYKGKILHFLQDSSIAELTLIPKCSQKKAQKITELRPFNNWE
ALFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNI
EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK
GPHLIVVPASTIDNWLREVNLWCPALNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYN
CAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLL
ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKLHRQYYTPE
KLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQHINSYQLDMDLILDSGK
FRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDE
FNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVI
KLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSVPADIATLLKTSMGL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggattaagattgaggaagct
cccgaagcagcccctcagccctcccagcccggtccttcgtcaccaatttcaattagtgct
gaagaggagaatgctgaaggggaagttagcagggcaaacaccccagactcagatgtaact
gaaaaaacagaagattctagtgttccagaacctccagacaatgaaagaaaagcaagttta
tcatgtttccaaaatcaaagagcaatacaggaatatattgatttatcatctgatagtgaa
gatgtttctccaaattgttccagtacagttcaagaggaaaaattcagcaaagacacagtg
attatagtttcagagccatctgaagatgaagaatcccatgaccttccttctgttacacga
aaaaatgacatttcagaactggaagacctttcggaattggaagatcttaaagatgctaag
cttcagacactgaaggaactgtttccacaaagaagtgacagtgatcttctaaagttgatt
gaatcaacaagcactatggatggagccattgctgctgccttgctgatgtttggtgatgca
ggtggtggacccaggaaaagaaagttatcatcttcttctgaggaggatgaagttaatgat
gatcagtctttaaaaaagcctcgaggggagcgtggagaagaatcaaatgaatctgcagaa
gctagcaacaactgggaaaagcaagaaagtattgtgttgaaattgcaaaaggaattccca
aattttgataaacaggaattaagagaagtgcttaaggagcatgaatggatgtacacagaa
gccttggagtctctgaaagtgtttgcggaagatcaagatgtgcagtgtgcttcacaaagt
gaggttacaaatggaaaagaagtttcaaggaataaaaattattctaaaaatgcagctaaa
ataaagatgaaacagaaaatttccatgaaaccacaaaatggctttaacaagaaacgtaag
aaaaatgtatttaatcctaagaaagccgtagaggactctgagtacgattcaggttctgat
gctgggagttcactggatgaggactacagtagttgtgaagaagtgatggaggacggctat
aaaggcaaaattcttcacttccttcaagattcttcgattgctgaactgactttgattcct
aagtgttctcagaaaaaggctcagaagataacagaactccggccctttaataattgggaa
gccctgtttacaaagatgtccaaaatcaatggcctatctgaagatttgatatggaattgt
aaaacggtaattcaagaaagggatgtagttataagacttatgaacaaatgtgaggacatt
tcaaataaattgaccaaacaagttaccatgctcaccggaaatggaggtggatggaacata
gaacaaccctcccttctaaaccaaagtttgtcactcaagccctatcagaaggttggtttg
aattggctggcattggtgcataagcatggacttaatggcattttggcagatgaaatgggc
ctaggaaaaaccattcaagccattgcattcctggcatacctctttcaagagggtaataaa
ggaccccatttgattgttgttccagcctccaccatagataactggttaagagaagttaac
ttatggtgtcctgctttaaatgtgctctgttactatggttctcaagaagagcgtaaacaa
attagatttaacatccataataaatatgaggattacaatgtaattgttacaacatataat
tgtgcaatcagcagctctgatgaccgcagtctctttcgacgactgaaactgaattatgca
atttttgatgaaggccatatgctgaagaatatgggctctatccgctaccagcacctaatg
acaattaatgcacgtaaccgtttactgctcacgggcacacctgtgcagaacaatctgcta
gaactcatgtcattgttgaattttgttatgccacacatgtttagcagtagcaccagtgaa
atccgaaggatgttttcttctaaaacgaaaccagcagatgagcagagtatatatgaaaag
gagagaatagcacatgcaaagcagatcataaaattacaccgccagtattacacgcctgag
aagctgaaggagatgtctcagctaatgctgaaggaacctacgcattgtgaggcaaaccct
gacctgatctttgaagacatggaagttatgacagattttgaactacatgtactttgtaaa
cagtatcaacacattaatagttaccagttagacatggatttaattttagattctggaaaa
ttccgagccttaggatgcatcttgtctgagttgaaacagaagggtgatagagttgtatta
ttcagccagtttaccatgatgctggatatattagaggttctgttaaaacatcatcaacat
aggtacctccgattagacgggaagactcagatttctgaaaggatccatctaattgatgag
tttaatacagatatggatatctttgtatttctcttgtcaactaaagctggtggattagga
ataaatctgacttcagcaaatgtcgttatacttcatgacatagattgcaatccatacaat
gacaaacaagcagaagacaggtgccatagagttggtcagactaaagaagtattagttatt
aaattaataagccaaggaactattgaagagtccatgctaaaaattaaccaacaaaagttg
aaactagagcaagacatgaccacagtagatgaagctgatgaaggaagtgtgccggcagat
atagccacattactaaaaacatcaatgggcctgtga
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