Mastomys coucha (southern multimammate mouse): 116099941
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Entry
116099941 CDS
T07224
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1
KO
K04648
dynactin 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04814
Motor proteins
mcoc04962
Vasopressin-regulated water reabsorption
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
mcoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116099941 (Dctn1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
116099941 (Dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116099941 (Dctn1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116099941 (Dctn1)
05016 Huntington disease
116099941 (Dctn1)
05022 Pathways of neurodegeneration - multiple diseases
116099941 (Dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116099941 (Dctn1)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116099941 (Dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116099941 (Dctn1)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116099941 (Dctn1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
116099941 (Dctn1)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
116099941 (Dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Filament
Motif
Other DBs
NCBI-GeneID:
116099941
NCBI-ProteinID:
XP_031239892
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MAQSKRHLYNRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKRE
GADAAAKTSKLRGLKPKKVAPTARKTTTRRPKPTRPASTGVAGPSSSLGPSGSASAGELS
SSEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRS
EDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMAD
TADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQ
LKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELGQA
ESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENAR
ETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQE
ASVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRP
GGDHDCVLVLLLMPRLICKAELIRKQAQEKFDLSENCSERPGLRGAAGEQLSFAAGLVYS
LSLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEP
LTKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATD
IALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGSQVSDTLLDCRKHLTWVVA
VLQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGSPSSSPYECLRQSCTILIST
MNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSL
KIKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQTLLRKKEKDFEETMDAL
QADIDQLEAEKAELKQRLNSQSKRTVEGLRGPPPSGIATLVSGIAGEEQQRGGTPGQAPG
ALPGPGLVKDSPLLLQQISAMRLHISQLQHENSILRGAQMKASLAALPPLHVAKLSLPPH
EGPGGNLVAGALYRKTSQLLEKLNQLSTHTHVVDITRSSPAAKSPSAQLMEQVAQLKSLS
DTIEKLKDEVLKETVTQRPGATVPTDFATFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGL
GQRHRLVLT
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagaggcacctgtacaatcggacgccgagtggcagcaggatgagtgcg
gaggcaagcgcccggcccctgcgggtaggatcccgagtggaggtgattgggaaaggccac
agaggtactgtggcctatgttggagccacactctttgccactggcaaatgggtgggcgtg
atcctggatgaagcaaaaggcaaaaatgatggcaccgtccagggaaggaagtatttcaca
tgtgatgaaggccatggcatctttgtacgacaatcccagatccaagtatttgaagatgga
gcagatactacttcaccagagactcctgactcttctgcttcaaaggtcctcaagagagag
ggagctgatgcagctgcaaagaccagcaaactgcggggactgaagcctaagaaggtggca
ccgacagcccgaaagaccacaactcgacggcccaagcctactcgcccagccagcactggg
gtggctgggcccagtagttccctcggcccctctgggtcagcatccgccggtgaactgagt
agcagtgagcccagcactccagctcagactccgctggcagcacccatcatccccacaccg
gccctcacctctcctggagcagcacccccacttccttctccctctaaggaagaggaaggg
ctgagggcccaggtacgggacctggaggagaagctggagaccctgcgcctaaaacgctca
gaagacaaagcaaagctgaaagagctggagaagcacaagatccagctggagcaggtgcag
gaatggaagagcaaaatgcaggagcagcaggcagacctgcagcggcgcctcaaggaggct
cggaaggaagccaaggaggcgctagaggcaaaggagcgctatatggaggagatggcggac
acagctgatgccatagagatggccactctggacaaggagatggccgaagagcgagctgag
tctctgcagcaggaggtggaggcactgaaggaacgggtagatgagctcaccacagatttg
gagatcctcaaggctgaaattgaagagaaaggttctgatggggctgcatcaagctaccag
ctcaagcagctagaggagcagaacgcccgtctgaaggacgccctggtgaggatgcgagat
ctctcatcctcagagaagcaggagcatgtgaagctccagaaactcatggaaaagaagaac
caggaactggaggttgtgaggcagcagcgtgagcgtcttcaggaggaactgggccaggca
gagagcaccatcgatgagctcaaagagcaggtggatgctgctctgggagctgaggagatg
gtggagatgctgactgaccgcaacctgaatctggaggagaaagtgcgggaattacgggag
actgtgggggacttggaagccatgaatgagatgaatgatgagctgcaggagaatgcacgc
gagacagagctggagctacgtgagcagctggacatggcaggcgcccgagtaagggaggcc
cagaagcgagtggaagccgctcaggagacagtcgcggactatcagcagacgatcaagaag
taccgccaattgactgcccacctacaggatgtcaatcgggagctaacgaaccagcaggaa
gcatctgtggagagacagcagcagccaccgccagagacttttgatttcaaaatcaagttt
gctgagaccaaggctcatgccaaggcgatagagatggaattgagacagatggaggttgcc
caggccaaccggcacatgtccctgctcacagcctttatgcctgacagcttccttcgacca
ggtggagaccatgactgtgtcctggtgctgctgctcatgccccgactcatttgtaaggca
gagctcatccggaagcaggcccaggagaaatttgacctaagtgagaactgttcagagcgg
cctgggctgcgaggagcagctggggagcagctgagctttgctgctgggctggtgtactcg
ctgagtctgctgcaagccacactgcaccgctatgagcatgccctctctcagtgcagtgtg
gatgtgtataagaaagttggcagcctgtacccggagatgagtgcccacgagcgctcctta
gatttcctcattgagctgctacacaaggatcagctggacgagactgtcaacgtggagccc
ctcaccaaggccatcaagtactaccagcatctgtacagcatccacctcgccgaacaaccc
gaggattccaccatgcagctggctgaccacatcaagttcacccagagtgccctggactgt
atgagcgtggaggtggggcggctgcgtgccttcttgcagggtgggcaggaggcaacagat
attgctcttcttctccgagacctggaaacatcatgcagtgacatccgtcagttctgcaaa
aagattcgaagacgaatgccagggacggatgctcctgggatcccagcagctctggccttt
ggctcacaggtatctgacacgctcctcgactgcaggaaacatttgacatgggtggtagct
gttctgcaggaggtggcagctgcagctgcccagcttattgcccccttggcagagaatgag
gggctgcctgtggctgcactagaggagctggctttcaaagcaagcgagcagatctatggg
agcccctccagcagcccctatgagtgtctacgccagtcatgtaccatcctcatcagcaca
atgaacaaactggccacagccatgcaagaaggcgagtatgacgcagagcggcccccaagc
aagcctcctccagttgaacttcgggctgcagctctgcgtgcagagatcacagatgctgaa
ggtctgggattgaagcttgaggatcgagagacagttatcaaggagttaaagaagtcactc
aagattaagggagaggagctgagtgaggccaatgtgcggctgagcctcctggagaagaag
ctggacagcgctgccaaggatgcagatgagcgaatcgagaaagttcagactcggctggag
gagactcagaccctgctgcggaagaaggagaaagattttgaggagacaatggatgcactc
caggctgacattgaccagctggaggcagagaaggcagagctcaagcagcgcttgaacagc
caatccaagcgcacagttgaggggctccggggtccccctccatcaggcattgctaccctg
gtctctggcattgctggtgaggaacaacagcgagggggcactcctgggcaggctccaggt
gccttgccaggcccagggctggtgaaggactccccactgctgcttcagcagatctctgct
atgaggttacacatctctcagctccagcatgagaacagcatcctcagaggagcccagatg
aaggcgtccttggcagctctgccccctctgcatgttgcaaagctttccctcccaccccat
gagggccctggtggtaacctagtggctggggcactgtatcgcaagaccagccagctgttg
gagaaattaaaccagctgagcacccacacccacgtagtagatatcactcgaagcagccca
gctgccaagagcccgtcagctcagcttatggaacaagtggctcagctcaagtccctgagt
gacaccattgagaagctcaaggatgaggtcctcaaggagacagtaactcagcgtcctgga
gctactgttcccactgactttgcgaccttcccttcatctgccttcctcagggccaaggaa
gagcagcaagatgacacagtctacatgggcaaagtgaccttctcatgtgcggcaggccta
ggacagcgacaccgcctggtgctgacc
DBGET
integrated database retrieval system
