Mastomys coucha (southern multimammate mouse): 116100594
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Entry
116100594 CDS
T07224
Symbol
Acan
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcoc00535
]
116100594 (Acan)
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116100594 (Acan)
04091 Lectins [BR:
mcoc04091
]
116100594 (Acan)
Proteoglycans [BR:
mcoc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
116100594 (Acan)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
116100594 (Acan)
Lectins [BR:
mcoc04091
]
C-Type lectins
Lecticans
116100594 (Acan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
hEGF
I-set
EGF_CA
Ig_3
ig
EGF_TEN
EGF_3
Motif
Other DBs
NCBI-GeneID:
116100594
NCBI-ProteinID:
XP_031240199
LinkDB
All DBs
Position
Unknown
AA seq
2169 aa
AA seq
DB search
MTTLLLVFVTLRVIAAVISEEIPDHDNSLSVSIPQPSPLKVLLGTSLTIPCYFIDPMHPV
TTAPSTAPLTPRIKWSRVSKEKEVVLLVATEGQVRVNSIYQDKVSLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMHGIEDSEATLEVIVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQGGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPEN
FFGVGGEDDITIQTVTWPDLELPLPRNITEGEALGNVILTAKPIFDLSPTISEPGEAFTF
APEVGSTAFPEGEERTEETTRPWGFPEEATRGPDSVTAFASEDLVVRVTISPGAAEVPGQ
PRLPGGVVFHYRPGSTRYSLTFEEAQQACMHTGAVIASPEQLQAAYEAGYEQCDAGWLQD
QTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPSSETYDVYCYVDKLEGEVFFATRLEQFTF
QEAQAFCAAHNATLASTGQLYAAWSQGLDKCYAGWLADGTLRYPIVTPRPACGGDKPGVR
TVYLYPNQTGLPDPLSKHHAFCFRGVSVAPSPGKEGGSIPTSPSDIEDWIVTRVGPGVDA
VPLEPETTEVPYFTIEPEKQTEWEPAYTPVGTSPLPGIPPTWLPTVPAAEEHTESPSASE
EPSGSEVPSASEEPYTPSLAVPSTTELPGSGEASGAPDLSGDFTGSGDASGHLDSSGQPS
GGIESGLPSGDLDSSGLSPTVSSGLPVESGSASGDGEVPWSRIPTVGRLPSGGESPEGSA
SGTGDLSGLPSGGEITETSASGAEEVSGLPSGGDGLETSTSGVEDVSGIPTGREGLETSA
SGVEDLSGLPSGEEGSETSTSGIEDISVLPTGGESLETSASGVGDLSGLPSGGESLETSA
SGAEGVTQLPTERGGLETSASGIEDITVLPTGRESLETSASGVEDVSGLPSGREGLETSA
SGTEDISVFPTEAEGLDTSASGTEDISVFPTEAEGLDTSASGGYVSGIPSGGEGLETSAS
GVEDLGLSTRDSLESSASGVDITGFPSGRGDTETSVSGVGDDLSGFPSGKEGLETSASGV
EDLGGLPSGKDDLSGSASGALDFGKLPSGTLGSGQTPDASGFPSGFSGEYSGVDIGSGPS
SGLPDFSGLPSGFPTVSLVDSTLVEVITATTASELEGRGTIGISGEGDVSGLPLSELGSS
ADISGLPSGTELSGQASGSPDISGETSGFFDVSGQPFGSSGISEGTSGIPEVSGQPSGIP
DTTETSGVTELSGLSSGQPDVSGEGSGILFGSGQSSGVTSVSGETSGIFDLSGQPSGFPV
FSGTAPGTPDLASGTTSGSGDSSGITFVDTSFVEVTPTTFKEEEGLGSVELSGFPSGEMN
LSGTSGEVDASGQSSGAIDSSGFTPSTPEFSGLPSGVTEASGEFSGIETGSSLPSGAFDG
SGLVSGFPTVSLVDRTLVESITQAPTAQEAGEGPSGILEFSGAHSGTPDISGDLSGSLDI
STLQSGQMEPSTEPPSSPHFSGDFSSTTDVSGESITATTGSGEASGLPEVTLITSELVEG
VTEPTVSQELGHGPSMTYTPRLFETSGEASASGDLGGAVTNFPGSGVEASVPEASSDPSA
YPEAGVGVSAAPEASSNLSEFPDLHGLTSAFHEADLEMTTPGTEVSSNPRTFQEGTKEEG
SAAPEVSGETSTTSDIDTGASGVSSATPMASGDRTEISGEWSDHTSEVNVAISTTIAESE
WAQPTQHPTETLQETESPNPSYSGEETQTAETTMSLTDAPTLSSPEGSGETESTDADIDE
CLSSPCLNGATCVDALDTFTCLCLPSYRGDLCEIDQEQCEEGWTKFQGHCYRHFPDRETW
VDAERRCREQQSHLSSIVTPEEQEFVNKNAQDYQWIGLNDRTIEGDFRWSDGHSLQFEKW
RPNQPDNFFATGEDCVVMIWHERGEWNDVPCNYQLPFTCKKGTVACGEPPVVEHARTLGQ
KKNRYEISSLVRYQCTEGFVQRHVPTIRCQPSGHWEEPRITCTDPNTYKHRLQKRSLRPT
RRSRPSMAH
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcttggtctttgtgactctgagggtcatcgctgcagtgatctcagaa
gaaattccagaccatgacaactcactgagcgtgagcatccctcaaccatccccactgaag
gtcctcctagggacttccctcaccatcccctgctacttcatcgaccccatgcatcctgtg
accactgccccctccactgcccccctcaccccaagaatcaagtggagccgtgtttccaag
gaaaaagaggtggtactgctggtggccaccgaaggacaggttcgagtcaacagcatctac
caagacaaggtgtcactccccaactatccagccatccccagcgatgccaccttggagatc
cagaaccttcgctccaatgactctgggatctatcgatgtgaagtgatgcatggcatcgag
gacagcgaagccaccctggaggtcatagtaaaaggtattgtgttccactacagagctatt
tccacacgctacactctagactttgaccgagcacagcgggcttgcctacagaacagcgcc
atcattgccaccccagaacaactgcaggctgcctatgaggatggcttccaccaatgcgat
gcaggctggctggctgaccagacagtcagataccccatccacactccccgggaaggttgc
tatggtgacaaggacgagttccctggagtgagaacctatggaatccgggacaccaatgag
acctatgatgtgtactgcttcgctgaggagatggagggcgaggttttttatgccacatct
ccggagaaattcaccttccaggaggctgccaacgagtgccggaggctgggggcacgcctc
gccaccacaggccagctctacctggcctggcaggggggtatggacatgtgcagcgctggc
tggctagcggaccgcagcgtgcgctaccccatctccaaggctcggcccaactgcggaggc
aacctcctgggagtaaggactgtctatctgcatgccaaccagacaggctatcctgatccc
tcatcccgctacgacgccatctgttacacaggtgaagactttgtagacatcccagaaaac
ttcttcggggtcggtggtgaagacgacatcaccatccagacggtgacctggccagacctg
gagctgcccctgccccgtaatatcacggagggagaagccctgggcaatgtgatcctcact
gcgaagcccatctttgacctgtccccgactatctcagagcctggggaggccttcacattt
gcccctgaagtggggagcacagccttcccagagggtgaggagagaactgaagaaaccacc
aggccctggggctttcccgaggaagccacacgtgggccggactctgtcactgcctttgcc
agtgaggacctggtggttcgagtgaccatctctccaggtgcagctgaagtccctggtcaa
ccccgcttgccagggggagttgtattccactaccgcccaggctccaccagatattctctg
acatttgaggaggcacagcaggcctgcatgcacaccggggcagtcattgcctctcctgag
cagctccaggctgcctatgaggcaggctatgagcagtgtgatgctggctggttgcaggac
cagaccgtcagataccccattgtgagcccacggactccatgtgtgggtgataaagacagc
agtccgggagtcaggacctacggcgtgcgcccatcatcagaaacctatgatgtctactgc
tacgtggacaagcttgagggggaagtgttcttcgccacacgtctcgagcagttcaccttc
caggaagcgcaggccttctgtgcagctcacaatgctaccctggcctccactggccagctc
tatgccgcctggagccagggcctggacaagtgctatgctggctggctggcagatggcacc
ctccgataccccatcgtcacccctcggcctgcctgtggtggggacaaaccaggcgtgaga
actgtctacctctatcccaaccagaccggcctccctgacccactatccaagcaccatgcc
ttctgcttccgaggtgtgtcagtggcgccctctccaggaaaagaaggaggtagcataccc
acatcgccctctgacatagaggactggatcgtcactcgggtggggcctggtgtggatgct
gtccccttggagccagagacaacagaagtgccatatttcaccattgagccagaaaaacag
actgagtgggagccagcctacactccagtgggcacatccccactgccagggatccctccc
acatggcttcccaccgtcccagcagcagaggaacatacagaaagtccctctgcctcggaa
gagccctctggctcagaagttccttctgcctcagaggagccatacacaccttcacttgca
gtgccaagcacgacagagctgccaggctcaggggaggcatccggggcacctgacctcagt
ggtgacttcacaggcagcggagacgcttcaggacaccttgactccagtgggcagccatca
ggaggcattgaaagtggtcttccctcaggtgaccttgactccagtggcctcagtcccaca
gtgagctcaggcctgcctgtagagagtgggtctgcctcaggagatggagaagtcccctgg
tcccgcattcccacagttggcaggctgccctctggaggtgagagtcccgaaggctctgcc
tctggaacaggagaccttagtgggctgccttcaggaggggaaattacagaaacttctgct
tctggggcagaggaagtcagcgggcttccttctggaggagacggtctagaaacttctacc
tctggagtagaggatgtcagtggaattcctactggaagagaaggtctagaaacttctgcc
tctggagtagaggacctcagtggacttccttctggagaagaaggttcagaaacatctacc
tctggaatagaggacatcagtgtacttccaactggaggagagagtctagaaacttctgct
tctggagtgggagacttgagtggacttccctcggggggagaaagtctagaaacatctgct
tcaggtgcagagggtgtcacccagcttcctactgaaagaggaggtctagagacttctgcc
tctggaatagaggacatcactgtgcttcctactggaagagaaagtctagaaacttctgcc
tctggagtagaggatgtcagtggacttccttctggaagagaaggtctagagacttctgcc
tctggaacagaggacattagtgtgttccctacggaagcagaaggtctagacacttctgcc
tctggaacagaggacattagtgtgttccctacggaagcagaaggtctagacacttctgcc
tctgggggatatgttagtgggattccttctggaggagagggtctagaaacttctgcctct
ggagtggaagatcttggcctttctactagagacagtctagagtcatctgcttcaggagta
gatattactgggtttccttctggaagaggggacacagagacctctgtttctggggtaggg
gatgacctcagtggatttccttctggaaaagaaggcctggagacctcagcttctggagtt
gaggaccttggtggcttgccttctggaaaagacgacttgtcagggtctgcttctggagcc
ctggactttggcaagctaccttctggaactctaggaagtggtcaaactccagacgcaagt
ggctttccttctggatttagtggtgagtattctggagtggacattggaagtggcccatcc
tctggcctgcctgactttagtggacttccatctggcttcccaactgtctccctcgtggac
agtaccttagtggaagtgatcacagccaccactgccagtgaactggaaggaagggggacc
attggcatcagtggtgaaggagacgtatcagggctgcccctcagtgaattgggcagtagt
gcagacattagtggtctcccttcaggaactgaactcagtggccaagcatctggatctcct
gatatcagtggagaaacatctggattttttgatgttagtgggcagccatttgggtcttct
ggtatcagtgagggaacatctgggattcctgaagttagtgggcagccatcagggattcct
gacaccactgagacatctggagtgactgagcttagtggactgtcctctggacaaccagat
gtcagtggagaagggtctgggattctctttggcagtggccagtcctctggcgtaacatct
gtgagtggagaaacctctgggattttcgatctcagtgggcagccctcagggttcccagtg
ttcagtggaactgcacctggaacccccgacctggcttctggcaccacgagtggcagcgga
gattcttctggcattacatttgtggacaccagttttgttgaagtgacccctaccacattt
aaagaagaagaggggttaggatctgtggaactcagtggcttcccttctggggagatgaat
ctgtctggcacatctggggaagtggatgccagtggacaatcttctggagcaattgattcc
agtggattcacaccctccactccagaattcagtggcctcccaagtggagtaactgaggcc
agtggagaattctctggaattgagactgggagcagcttaccctcgggagcatttgatggc
agtggacttgtttcaggtttccctactgtgtctcttgtagacagaactttggtggaatct
ataacccaggctcctaccgctcaagaagctggagaaggaccttcgggcattttggaattc
agtggtgcccattctggaacaccagacatatctggagacctttctgggtctttggacata
agcacattgcagtctgggcagatggaacccagcacagagccaccaagctctccacatttt
agtggagacttttctagcaccactgatgtaagtggagaatccataactgccacaactggc
agtggggaagcctctgggcttccggaagtcactttaatcacttcagagttagtggaggga
gtgactgaaccaactgtttcccaggaacttggccatggtccttctatgacatatactccc
cggctctttgagaccagtggggaagcctcagcatctggggaccttggtggagctgtaaca
aacttcccagggtctggggtagaagcatcagtcccagaagccagcagtgacccatctgct
taccctgaggctggagtgggagtgtctgctgcccctgaggccagcagtaacctgtctgag
ttcccagatctgcatggactcacctctgccttccatgaagcagatctggagatgacaacc
ccaggcacagaggtgagcagcaacccgaggacctttcaggaaggcaccaaggaggaggga
tcagctgctccagaagtgagtggagaaactagcactacctccgacatagacacaggggct
tcgggtgtgtcttctgctacacccatggcttctggagacaggactgaaatcagtggagaa
tggtctgatcacacctcagaggtgaacgttgccatcagcaccaccatcgcagagtctgag
tgggcccagcctacccagcaccctacagagacacttcaagaaaccgaatccccaaatccc
tcctactcaggagaggagacccaaacagcagaaacaaccatgtccctgacagacgccccg
accctctcttctccagaagggtcaggggaaacagagtcaaccgatgcagacattgatgag
tgcctctcaagcccttgtctgaatggagccacctgcgtggatgccttggacactttcaca
tgcttatgccttccgagctacagaggggacctgtgtgagatcgaccaggagcaatgtgag
gaggggtggaccaagttccagggccactgttaccgccactttcctgaccgtgagacctgg
gtggatgcggagagacggtgtcgggagcagcagtcacatctgagcagcattgtcactcct
gaagaacaagagttcgtcaacaaaaatgcccaagactaccagtggatcggtctgaatgac
aggactatcgaaggagacttccgctggtctgatggacactccctgcaatttgagaagtgg
cgtccaaaccagcccgacaacttctttgccacaggagaggactgtgtggtgatgatctgg
catgagaggggcgaatggaacgacgtcccctgcaattaccagctgcccttcacgtgtaaa
aagggcacggtggcctgtggagaacccccagtggtggagcatgcgagaaccctcgggcag
aagaagaatcgctatgagatcagctccctagtgcggtaccagtgtacggagggctttgtc
cagcgccatgtgcccaccatccggtgccagcccagtgggcactgggaagagcctagaatc
acctgcacagaccccaacacctacaagcataggctacagaagcggagcttgagacctaca
cggaggagccgccccagcatggcccactga
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integrated database retrieval system
