Mastomys coucha (southern multimammate mouse): 116101006
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Entry
116101006 CDS
T07224
Symbol
Npas4
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116101006 (Npas4)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116101006 (Npas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
116101006
NCBI-ProteinID:
XP_031240562
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGT
PLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIY
DIIDPADHLTVRQQLTMPSALDTDRLFRCRFNTSKSLRRQSAGNKLVLIRGRFHAHPPGA
YWAGNPVFTAFCAPLEPRPRPGPGPGPGPGPASLFLAMFQSRHAKDLALLDVSESVLIYL
GFERSELLCKSWYGLLHPEDLAHASSQHYRLLAESGDIQAEMVVRLQAKHGGWTWIYCML
YSEGPEGPITANNYPISDTEAWSLRQQLNSEDTQAAYVLGTPAVLPSFSENVFSQEQCSN
PLFTPALGTPRSASFPRAPELGVISTSEELPQPSKELDFSYLPFPARPEPSLQADLSKDL
VCTPPYTPHQPGGCAFLFSLHEPFQTHLPPPPSSLQEQLTPSTVTFSEQLTPSSATFPDP
LTSSLQGQLTESSARSFEDQLTPCTSTFPDQLLPSTATFPEPLGSPTHEQLTPPSTAFQA
HLNSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSV
DVPLVPEGLLTPEASPVKQSFFHYTEKEQTEIDRLIQQISQLAQGMDRPFSAEAGTGGLE
PLGGLEPLNPNLSLSGAGPPVLSLDLKPWKCQELDFLVDPDNLFLEETPVEDIFMDLSTP
DPNGEWGSGDPEAEVPGGTLSPCNNLSPEDHSFLEDLATYETAFETGVSTFPYEGFADEL
HQLQSQVQDSFHEDGSGGEPTF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgttccaccaagggcgcttccaaggcgcgccgcgaccagatcaacgccgagatt
cggaacctcaaggaactgctgccgttggctgaagcggacaaggtccggctgtcctacctg
cacatcatgagtcttgcctgcatctacactcgcaagggtgtcttctttgctggaggtact
cctttggctggccccacggggcttctctctgctcaagagcttgaagacatcgtggcagca
ctacctggatttctgcttgtgttcacagctgaggggaagttgctatacctgtcggagagt
gtgagcgagcatctgggccactctatggtggacttggttgcccagggtgacagtatctac
gacatcattgaccctgctgaccatctcactgtgcgccagcagctcactatgccctctgct
ctggatactgatcgccttttccgttgtcgattcaacacctccaagtccctccggcgccag
agtgcaggcaacaaactggtgcttattcgaggtcgattccatgctcacccacctggggcc
tactgggcaggaaaccccgtgttcacagctttctgtgccccactggagccaagaccccgc
cctggccctggccctggccctggccctggtcctgcttctctcttcctggccatgttccag
agccggcatgctaaggacctagccctactggatgtttctgaaagtgtcctaatctacctg
ggctttgagcgcagcgaactgctctgtaaatcatggtatggactgctacaccccgaggac
ctggcccacgcttcttctcaacactaccgcctgttggctgaaagtggagatattcaggct
gaaatggtggtgagacttcaagccaagcatggaggctggacatggatttactgcatgcta
tactcagaaggtccagaaggccctattactgccaataactaccctatcagtgacacggaa
gcctggagcctccgccagcagctaaactctgaagacacccaggcagcctatgtcctagga
accccggctgtgctaccctcattctctgagaatgtcttctcccaggagcaatgctctaac
ccactctttacaccagccctggggactcctagaagtgccagcttccccagggctcctgaa
ctaggtgtgatctcaacatcagaagagcttccccaaccctccaaagagctggacttcagt
tacctgccattccctgctaggcctgagccttccctccaagcagacctgagcaaggatttg
gtgtgtactccaccttacacaccccaccagccaggaggctgtgccttcctcttcagcctc
catgaacccttccagactcacttgccccctccacccagctctctccaagaacagctgacg
ccaagcacggtgactttctctgaacagttgacacccagcagtgcaacctttccagatcca
ctaaccagttcactacaaggacagttgactgaaagctcagccagaagctttgaagaccag
ttgactccatgcacctctaccttccctgaccagctacttcccagcactgccacattccca
gaacctctgggtagccccacccatgaacagctgactcctcccagcacagcattccaggct
catctgaacagtcccagccaaaccttcccagagcaactgagccccaatcctaccaagact
tacttcgcccaggagggatgcagttttctctatgagaagttgcccccaagtcctagcagc
cctggtaatggggactgtacactcctggccctagctcagctccggggccccctctctgtg
gacgttcccctggtgcctgaaggcctgctcacacctgaggcctctccagtcaagcaaagt
ttcttccactacacagagaaagagcaaactgagatagatcgtctcatccagcagatcagc
cagttggctcagggcatggacaggcccttctcagctgaggctggcactggggggctggag
ccacttggagggctggagcccctgaaccctaacctgtccctgtcaggggctggaccccct
gtgcttagcctggaccttaaaccttggaaatgccaggagctggacttcctggttgaccct
gataatttattcctggaagagacgccagtggaagacatcttcatggatctttctactcca
gaccccaatggggaatggggttcaggggatcctgaggcagaggtcccaggagggaccctg
tcaccttgcaacaacctgtccccagaagatcacagcttcctggaggacttggccacctat
gaaaccgcctttgagacaggtgtctcaacattcccctatgaagggtttgctgatgagttg
catcaactccagagccaagttcaagacagcttccatgaagatggaagtggaggggaacca
acgttttga
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