Mastomys coucha (southern multimammate mouse): 116101517
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Entry
116101517 CDS
T07224
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116101517 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116101517 (Cnot3)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116101517 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116101517 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
116101517
NCBI-ProteinID:
XP_031240910
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPPATSALSSTPGNNGASTPAAPTSALGPKASP
APSHNSGTPAPYAQAVAPPNASGPSNAQPRPPSAQPSGGSGGGSGGSSSNSNSGTGGGAG
KQNGATSYSSVVADSPAEVTLSTSGGSSASSQALGPTSGPHNPAPSTSKESSTAAPSGAG
SVASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKTAGTLLNGPPQFSTTPEIKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTDRDIILSTSAPPTSSQPPLQLSEVNIPLSLGVCPL
GPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEF
YQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQG
TYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcaaaagctccacaatgcggccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaatgagatcaaggacaaaaggcagcttatcgaaaac
cgcaagctcattgaaacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggagggtctgggtctagctcagaaggtggaccctgcccagaaggag
aaggaagaagttggccagtggctcacgaacaccattgacaccttaaatatgcaggtggac
cagtttgagagtgaagtggagtcactgtctgtacagacgcgcaagaagaaaggcgacaag
gatcagaagcaggaccggattgagggcttaaagcggcacatcgagaagcaccgctaccat
gtacgtatgctggagaccatcctgcgtatgctggacaatgactccatcctggttgatgcc
atccgcaagatcaaggatgatgtggagtactacgttgactcatcccaggaccctgacttt
gaagagaacgaattcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggacgagatcttcaaccagtctagcagt
acacccacctcaacaacctccagctctcccatcccacccagcccagcaaactgcactacg
gaaaactctgaagatgataagaagagaggccgctccacagatagtgaagtcagccagtct
ccagccaaaaatggctccaagcctgtccacagcaaccagcacccccagtccccagctgtg
ccgcccacctacccctctggccccccacctgccacttctgccttgagctccacccctggc
aacaatggggcctctaccccagcagcacctacaagtgccctgggccctaaggccagtcca
gctcccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaat
gccagcgggcccagcaatgcccagccccggccccccagtgcccagccaagcgggggaagt
ggtggtggcagcggagggagcagcagcaatagtaacagtggcacaggcggaggggctggc
aagcagaacggtgccaccagctatagttcagttgtggcagacagccctgcagaggtgacc
ctgagtaccagtggaggcagcagtgccagcagccaagccctggggcccacttcaggccct
cacaacccagctcccagcacctcaaaagaatccagtactgcggccccatcgggggctggg
agtgtggcttcaggctcagggaacaactcaggggggcccagcctcttggtgccgctgcct
gtaaatccccccagttctccaacgcccagcttcagtgaagccaagacagctggtaccctg
ctcaatggtcctccacagttcagcaccaccccagaaatcaaggcccctgaacctctcagc
tctctgaagtccatggcagaacgggcagctatcagctctggtattgaggaccctgtgcca
acgttacacctaactgatcgagacatcatcctgagcacatcagcaccacccacctcatcc
cagccacccctgcagctatcagaggtgaacataccattgtcactgggcgtctgtccactg
gggccagtgtccctcaccaaggagcagctataccaacaggccatggaagaggccgcctgg
caccacatgccccacccctctgactccgagcgtattcggcagtacctcccccggaaccct
tgcccgacacccccctaccaccaccagatgccacccccacactcggacactgtggagttc
taccagcgcctgtcaactgagacgctcttcttcatcttctactatctggagggaaccaag
gcacagtacttggcagccaaggccctaaagaagcagtcctggcgattccacaccaagtat
atgatgtggttccagaggcacgaggagcccaagaccatcacagatgagtttgagcagggc
acctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcaccttt
gagtatcgctacctggaggaccgggacctccagtga
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integrated database retrieval system
