Mastomys coucha (southern multimammate mouse): 116101693
Help
Entry
116101693 CDS
T07224
Symbol
Hif3a
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116101693 (Hif3a)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116101693 (Hif3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1
PAS
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
116101693
NCBI-ProteinID:
XP_031241326
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MGGGRWASRALEPRRASHGVGAAAREVEHRAAEGEVAGCGSQPAQPGDGGAVPAGAHSTL
CARRQRAPGQGLHHASHNQLPAHAPPLRCRGVEPGGKRGRTTGRLLPEGPGGFRHGTHRR
GRHGLPVGECQQAPGPQSVDLCSSSLIHNPTPGTNFSLELIGHSIFDFIHPCDQEELQDA
LTPRPSLSKKKLEAPTERHFSLRMKSTLTSRGRTLNLKAATWKVLHCSGHMRAYKPPAQT
SPAGSPRSEPPLQCLVLICEAIPHPASLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGY
SPDDLIGCSAYEYIHALDSDAVSRSIHTLLSKGQAVTGQYRFLARTGGYLWTQTQATVVS
GGRGPQSESIICVHFLISRVEETGVVLSLEQTEQHTRRPPQLGTSSQKGIPGNSLDSPAP
RILAFLHPPALSEASLAADPRRFCSPDLRRLMAPILDGPPTAATPSTPQAARRPQSPLPA
DLPDQLAVGLENAHRLSSARKNKTLETDLDTAQDPDTLDLEMLAPYISMDDDFQLNSNEQ
LPKVHRRPARVARRPRARSFHGLSPPIPEPSLLPRWGSDPRLNCSSPSRGDPPTASLTPR
TRKRALAQSSEDKGLELLETKPPKRSPRLEPGSFLLPPLSLSFLLQGRQLPGNQQDPRAP
LLSSHEPSGLAPSLLSLCQHEETIQPRNHFPAAAGLAQTH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggagggggacgctgggcatcgagggctctggaaccacgaagggcgagccatggcgtt
ggggctgcagcgcgtgaggtcgagcaccgagctgcggaaggagaagtcgcgggatgcggc
tcgcagccggcgcagccaggagacggaggtgctgtaccagctggcgcacactctaccctt
tgcgcgcggcgtcagcgcgcacctggacaaggcctccatcatgcgtctcacaatcagcta
cctgcgcatgcaccgcctctgcgctgcaggggagtggaaccaggtgggaaaagggggaga
accactggacgcctgctacctgaaggccctggagggtttcgtcatggtactcaccgccga
gggagacatggcttacctgtcggagaatgtcagcaagcacctgggcctcagtcagtggac
ctctgttcctcctccctgatacataaccccactcctggtaccaatttctctctggagctc
atcgggcacagtatctttgattttatccatccctgtgaccaagaggaactccaagatgcc
ctgactcccaggccaagcctgtcaaaaaagaagctggaagcgccaacagaacgtcacttt
tccctgaggatgaagagcacactcaccagcagggggcgcacgctcaacctcaaagcggcc
acctggaaggtgctgcactgctcaggacatatgagggcctacaagccccctgcacagact
tcccctgccgggagccctcgctccgagcctcccctgcaatgcctggtgcttatctgtgaa
gccatcccccacccagccagtctggagcccccgctgggccgaggggcctttctcagtcgc
cacagcctggacatgaagttcacatactgcgacgagaggattgcagaagtcgctggttat
agccctgatgacctgattggctgttctgcctatgaatacatccacgctttggactctgat
gcggtcagcaggagcatccacactttgctgagcaagggccaggcagtaacggggcagtat
cgcttcctggcccggactggaggctatctgtggactcagactcaggctacagtggtgtca
ggggggcggggcccccagtcggaaagtatcatctgcgtccacttcctgatcagccgtgta
gaagagactggagtggtgctgtccctggaacaaacagagcaacatactcgcagaccccct
cagctgggtacctcctcgcagaagggtattcctggcaacagcctagactctcctgctcct
cggatcctggccttcctgcaccctccggccctgagtgaggcctccctggctgctgaccct
cgtcgtttctgtagtccagacctgcgccgcctcatggcacccatcctggatggacctccc
acagctgccacccccagcaccccacaagctgcacggagaccccaaagtcctcttccggct
gatctcccagatcagttggcggtaggcttggaaaatgcacacagactctcttctgcccgg
aaaaacaagaccttggagacagatctagatacagctcaggaccctgacactctggacttg
gagatgctggccccatacatctccatggatgatgacttccagctcaactccaacgaacaa
ttgcccaaagtccaccgcagacctgccagggtggcccgcaggccccgtgctcggagcttc
cacggcctgtcgccccccatccctgagccctccctgctgccccgctgggggagtgatcca
agactgaactgttccagcccttccaggggggatccccccacagcctccctgacgcctaga
actcggaagagggccttggcccagagctcagaggacaaagggttggagctgctggaaaca
aagcctcccaagaggtctccaagactagaacctggaagcttcctgctgcctccactcagc
ctgagttttcttctgcaaggtcgacaactcccagggaaccagcaggaccccagagcccca
ctcctgagttctcatgaaccctcaggcctagctccctcgctgctctctctctgccagcat
gaggaaactatccagcccaggaaccacttcccagcagcagcaggcttggcccagacccac
tga
DBGET
integrated database retrieval system
