Mastomys coucha (southern multimammate mouse): 116101738
Help
Entry
116101738 CDS
T07224
Symbol
Six5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116101738 (Six5)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116101738 (Six5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116101738
NCBI-ProteinID:
XP_031241383
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MATSPAEPSAGPAARGEAAAATEQQEEEARQLLQTLQAAEGEAAAAAAGAGDAAAAAADS
GSTSDPGSPRETVTEAPAGLRFSSEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSD
PVLRARALVAFQRGEYAELYQLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVD
KYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQ
VSNWFKNRRQRDRTGTGGGAPCKSESDGNPTTEDESSRSPEDLERGVASVAAEAPSQSSI
FLAGATPPATCPASSSILVNGSFLAASSPPAVLLNGSPVIINSLALGEAPSLGPLLLTGG
GGAPQPQSSLQGVSEAKTSLVLDPQTGEVRLDEAQSEAPENKGVHGTTPGEEIPGTLPQV
VPGPPPATTFPLTPGAVPAVAAPQVVPLSPSSGYPTGLSPTSPRLNLPQVVPTSQVVTLP
QAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSSVGVTALQLPSSTAPGNFLLANPVSGS
PIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKQEPAIAVPEGALPVGPSPTL
PEGHTLGPISTQPLPPAPVVTSATSLPFSPDSSGLLSSFPAPLPEGLMLSPAAVPVWPAG
LELSTGVEGLGTQATHTVLRLPDPDPQGLLLGATAGTEVDEGLEAEAKVLTQLQSVPVEE
PLEL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcgcctgccgagccgagcgcggggccggcggctcggggggaggcggcggcg
gcgaccgagcagcaggaggaggaagcgcgccagcttctgcagactctgcaggcagccgag
ggggaggcggcggcggcggcggccggggcgggagacgcggcggcggcagcggcggactct
gggtccacgagcgacccggggtctccccgggagaccgtgaccgaggcgcccgctggcctt
cgcttctcgtccgagcaggtggcatgcgtgtgcgaggcgctgctgcaggcgggccacgcc
ggccgcttgagccgcttcctgggcgcgctgcccccggccgagcgcctacgtggcagcgat
ccggtgctgcgcgcgcgggccctggtggccttccagcgcggggaatacgccgagctctac
caacttctcgagagccgccctttccccgccgcccaccacgccttcctgcaggacctctac
ctgcgggcgcgctaccacgaggccgagcgggcccgtggccgtgcgctgggcgcggtggac
aaataccggctgcgcaagaagttccctctgcccaagaccatctgggatggcgaggagacc
gtctactgcttcaaggagcgctcgcgagccgcgctcaaggcctgctaccgcggcaaccgc
tatcccacaccagacgagaagcgccgcctggccacgctcaccggcctctcgcttacacag
gtcagcaactggttcaagaaccggcgacagcgcgaccgcacggggaccggcggtggagcg
ccttgcaaaagcgagtctgatggcaaccccactacggaggatgagtccagccgcagtcca
gaggacctggagaggggtgtggcctccgtggctgcggaggcccccagccagagttctatc
ttcctggcgggggccacccctcctgcgacgtgccccgcctcctcctctatcctagtgaat
gggagcttcctggccgccagcagccccccagcagtgctcctcaatggtagcccagtcatc
atcaatagtttggccctaggagaggcccccagcttggggcccttgctactcacaggagga
gggggcgcccctcaaccacagtccagtctccagggggtcagtgaggccaagacttctctg
gtcctggaccctcagacaggagaggttcgactggatgaggctcagtctgaggcccctgaa
aacaaaggggttcatgggactactcctggagaggagatcccaggaaccctgccccaagta
gtcccaggccccccacctgccaccaccttccccctgaccccaggagctgtgcctgctgtg
gctgctcctcaggttgtaccactctccccttcttctgggtacccaacaggcctgagcccc
acctccccacggctgaatttgccccaggtggtgcccacctctcaggtggtaaccctgcct
caggctgtggggccactccagctgttggcagctgggccaggcagtcctgtgaaggtggca
gctgcagcggggcctgccaatgtgcacctgataaactctagtgtgggagtgactgcgcta
caacttccctcatccactgctccaggaaacttcctcctggccaaccctgtatctggcagc
cccattgtcactggggtagctgtgcagcagggcaagatcatcctcactgccaccttcccc
accagcatgctcgtctcccaggtcctgcctcctgccccaagtctagcccttcccctgaag
caggagccagctatcgcagtgcctgaaggagccctcccagtaggccccagccccaccctc
ccagagggtcacactctggggccaatctctactcagccactgccacctgctcctgttgtc
acctctgccaccagcctgcctttctctccagactcctctggcctgctttccagcttccca
gcacccctgcctgagggtctgatgctgtcacctgcagctgtgccagtctggccagcgggg
ctggaactgagcacaggtgtagaggggctggggacacaggccacccacactgtgctgagg
ctgccagaccctgacccccaggggctgctcctgggggctacagcagggactgaggttgat
gaggggctagaagctgaggccaaggtcctgacccagctgcagtcagtgcctgtggaggag
cccttggaactgtga
DBGET
integrated database retrieval system
