Mastomys coucha (southern multimammate mouse): 116101880
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Entry
116101880 CDS
T07224
Symbol
Sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04517
IgSF CAM signaling
mcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116101880 (Sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116101880 (Sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116101880 (Sptbn4)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116101880 (Sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
116101880 (Sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
Rv3651-like_N
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
116101880
NCBI-ProteinID:
XP_031241694
LinkDB
All DBs
Position
Unknown
AA seq
2609 aa
AA seq
DB search
MRIWPSGGPAGPNRAGPGPATNARREGGAARRASGTASAAGAQALPSPMAQVPGEVDNME
GPAASNNNNPSARWESPDRGWDREPPAAANAAASLFECSRIKALADEREAVQKKTFTKWV
NSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHSLENVDKALQFLK
EQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRETRSAKDALLLWCQ
MKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANYNLQRAFRTAEQH
LGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVLEVDKII
ERYEELAAELLAWIHRTVDLISNQKFANSLSGVQQQLQAFTAYCTLEKPVKFQEKGNLEV
LLFSIQSKLRAHNRRLFVPREGCGIWDIDKAWGELEKAEHEREAALRAELIRQEKLELLA
QRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIAAYEERVQGVAEL
AQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQKVFQEMVYMVDWM
EEMQTLLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAALRFSQLQGYQPCD
PQVICNRVNHVHGCLSELQEQAARRRAELEASRSLWALLQELEEAESWARDKERLLEATS
GSGGAAGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRRGEELAAAGGSVGPGA
EPLHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDGLLDWLRDAYRLA
AAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASGAGPLVVALQVRV
VEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWLLAMRVPDSLDDV
EVVQHRFESLDQEMNSLMGRVLDVNQTVQELVEGGHPSSDEVRSCQDHLNSRWNRIVELV
EQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRLSGLEAALQALEP
RQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALAGAAQACGEAVAAAGRLQRFLRD
LDTFLDWLVRAQEAAGAVEGPLPRSLEEADGLLARHAALKEEVDQREEDYARIVAASEAL
LASDGAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQLFLRDLCQALAVLH
NQEVALSGAELPCTVESVEEAMKRHRDFLTTMELNQQKMQVAVQAAESLLRQGNAYGEQA
QEAVARLLEKSQENQLRAQQWMQKLLDQLVLQHFLRECHELDGWIHEKMLMARDGTREDS
HKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKKLGEIRQCWAELE
STTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLATVNSQLKKLQSME
SQVEEWCREVGELQAQTAALPLEQASKELVGERQSAVGERLVRLLEPLQERRRLLLASKE
LHQVAHDLDDELAWVQERLPLAMQTERGTGLQAVQQHIKKNQGLRREIQAHGPRLEEVLE
RAGVLASLRSPEAEAVRRGQEQLQSAWTGLREATERRQQTLDAAFQVEQYYFDVAEVEAW
LGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQCRALLEMGHPDSE
QISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQVDELEHWIAEKEVVAGSPELG
QDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAATMAEWKDGLNEAW
AELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPPEPRPSASSMQRT
LRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGWKELLAACEDARL
HVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYHQGLKTELEARVP
ELAACQELGRSLLLNKSAMADEIQAQLDKLGSRKEEVSEKWDRHWEWLQQMLEVHQFAQE
AVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKL
KAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYDRGLEPLARRASDTLSAEVRTRV
GYVRQELKPERLQPRIDRLPETLGKVEPAAPTAAALDTTDTPGTPAVMEQVRPRPERQEL
ADRAEELPRRRRSERQESMDQPEEAARRRRPERQESADHEGPHSLTLGRYEQMERRRERR
ERRIERQESSEQETPTRGELVKGKATLADIVEQLQEKEAGPGLPAGVPSLPQPRELPPGR
LPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQGGSTPAPPPPP
THTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDSKGPASGGTHGGEPLL
NLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVANSVAEHAEIARW
GQTLPTTSSTDEGNPKREGGERRASGRRK
NT seq
7830 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctggccgagcggcgggccggcggggccgaacagagccgggcccggcccggcg
acgaatgcccgcagggagggcggtgctgcgcggcgagcatccgggaccgcatcggcggcc
ggcgcccaggccctgccttccccaatggcacaagtaccaggggaagtggacaacatggag
ggcccagcagcctccaacaacaacaacccttcagcccgctgggagagcccagatcggggc
tgggatcgggagcctccggcagccgccaacgctgctgcttcgctcttcgagtgctctcgg
atcaaggccttagcagatgagcgagaggctgtgcagaagaaaaccttcaccaagtgggtg
aattcgcacctcgcccgcgtaggctgccatattggagacctgtatgcagatcttcgggat
gggtttgtgctcacccggctcctggaagtgctgtctggggagcagctgccgaggcccact
cgcggccgcatgcggatccactcactggagaacgtggacaaggctctgcagttcctgaag
gagcagcgagtgcacctggagaacgtggggtcacatgacatcgtggatgggaatcaccga
ctgacgctggggctggtctggaccatcatcctgcgcttccagattcaagtcatcaagatt
gagacagaagacaacagagagacccgctcagccaaggacgctctgcttttgtggtgccag
atgaaaactgctggttaccctgaggtaaacatccagaatttcaccaccagctggagagat
ggcttggccttcaatgccctcatccatcgtcacaggcctgatcttgtggacctcagcaaa
cttaccaagtccaacgccaactacaacctgcagagagctttccgcacagccgagcagcac
ctggggctagcacgtctgctggaccccgaagatgtgaacatggaagctccagatgagaag
tccatcatcacctatgtggtctccttctaccactacttctccaagatgaaggctctggct
gtggagggaaagcggattgggaaggtcctggaccaggtgttggaggtggacaagatcata
gagcgctatgaggagctggcggcggagctgctggcctggatccaccgcaccgtggacctc
atcagcaaccagaagtttgccaactcactgagtggggtgcagcagcagctgcaagctttc
actgcctactgcacgttggagaagccggtcaagtttcaggagaaggggaacctggaagtg
ctactcttcagcatccaaagcaagctgcgcgcccacaaccggcgcctctttgtgcctcgg
gaaggctgtggcatctgggatattgacaaggcatggggtgagctggagaaggcagagcat
gagcgggaggcggccctcagagctgagctcatccgacaggagaagctggaactcttggct
caaagatttgaccacaaggtggccatgagggagagctggctaaatgagaaccagcgcctg
gtctctcaggacaacttcggatatgagctgccggcagtggaggcagccatgaagaagcac
gaagccattgaggcagacattgcagcctacgaagagcgggttcagggtgtggcggagcta
gcccaggcattggcagctgaaggctactatgatgctcggagagtggcagcacagcgtgac
agtgtccttcgccagtgggccctgctgactgggctggtaggtgcccggcggacccggctt
gaacagaatctggccctgcagaaggtcttccaggagatggtctacatggtggactggatg
gaagagatgcagactctgctgctgtctcgggaatgtgggcagcatctggtggaggccgac
gacctgctgcagaagcatgggctgctggagggggacatcgcagcccagagtgagcgggtg
gaggccctcaatgctgcggccctgagattctcccagttacagggctatcagccctgcgac
cctcaggtcatttgcaaccgtgtgaaccacgtgcacggctgtctgtcggagctgcaggag
caggcggcacggcggcgcgcggagctggaagcctcgcggagcctgtgggctttgctgcag
gagctggaggaggcggagagctgggcgcgggacaaggagcgcctcctagaggccacgagc
ggcagtggcggcgcggcgggcacggcgggcggcgcgcacgacctgtccagcaccgctcgc
ctgctggcgcagcacaagatcctgcagggcgagctgggcggccggcgggcgctgctgcag
caggcgctgcgacgcggggaagagctggctgcggcgggcggctccgtgggcccgggcgcc
gagcccttgcacttggctggcctggcggagcgcgcggctagcgctcggcgccgctggcag
cggctggaagaggcggctgcgcgccgggaacggaggctacaggaggcgcgggcgctgcac
cagtttggcgccgacctggacgggctcctggactggcttcgcgacgcgtatcgtctggca
gccgccggagatttcggtcacgacgaagcatccagccgtcgcctggcgcgccagcaccgc
gctctcaccggggaggtggaagctcaccgtggccctgtcggtggcctgaggcgccagctg
gcgacactgggaggagccagtggcgccgggccgctggtggtggcactgcaggtgcgggtg
gtggaagccgaacaattgtttgcagaggtgaccgaggtggccgcgctgcgacgacagtgg
cttcgggacgcgctcgcggtgtaccgcatgttcggcgaggtgcacgcctgcgagttgtgg
atcggggagaaagagcagtggctgctggccatgcgtgtgcccgattccctcgacgacgtt
gaggtggtgcagcaccgatttgaaagtctggaccaggaaatgaacagcctgatgggccga
gtcctggatgtgaaccaaacagttcaggagttggtggaaggaggtcatcccagctccgat
gaggtgcgctcctgtcaggaccatctcaacagcaggtggaaccgcatcgtggagctggtg
gaacagcgcaaagaggagatgagcgccgtactgctggtagagaaccacgtgctggaggtg
gccgaggtgcgcgcccaggtgcgcgagaagcggcgtgcggtggagagcgcgccccgggcg
ggcggagccctgcagtggcgcctgagtggcctggaggcagctctgcaggcgctggaaccg
cgacaggcggcgctgctggaggaggcggcgctgctggctgaacgcttcccggcacaggcg
acgcgcctgcaccagggcgcagaggagctaggagccgagtggggcgcactggctggagcg
gctcaggcttgcggcgaggcggtggcggcggcaggtcgcctgcagcgtttcctgcgcgat
ttggataccttcctggactggctggtgcgggcgcaagaggcagcgggcgccgtcgagggg
ccgctgccgcgaagcctggaggaggcggacgggctgctggcgcgccacgccgcgctcaag
gaggaggtggatcagcgcgaggaggattacgcgcgcatcgtggctgccagtgaggcgctg
ctagcgtctgacggcgcggagctgggccccggtctggcactagacgaatggctgccccac
ctcgaggttggctggcacaaactgctcggcttgtgggaggagcgcagggaagcgctagtc
caggcgcacgtctatcagctcttcctgagagacctgtgccaggcgcttgcggtgctgcac
aaccaggaggtggcgctgtctggcgctgaactcccttgcacagtggagtcggtagaagag
gcgatgaaaaggcaccgggattttctcaccacgatggagctgaaccagcaaaagatgcag
gtggcagttcaagctgcagagagcctgctgcggcaaggcaacgcctacggggagcaggcc
caggaggcagtggctcggctgctagagaagagccaagaaaatcagctgagggcccagcag
tggatgcaaaagctactggaccagcttgtgctgcagcactttcttagagagtgtcatgag
ctggatggctggatccatgagaagatgctgatggctcgtgatggcacccgggaagacagc
cacaagctgcacaagagatggctccggcaccaggcgttcatggctgagctggctcagaat
aaggagtggctggagaagatagaaagggagggccagcaactgatgcaggagaaaccggag
ctggcagcctctgtgcgcaagaaattaggtgagatccggcagtgctgggcggagctggag
agcaccactcaggccaaggcgcgccagctctttgaggccagcaaggcggaccagctagtg
cagagctttgcggagctggacaagaggttgcttcacatggaaagccagctgcaagatgta
gaccccggtggggacctggccactgtcaacagccagctcaagaagttgcagtccatggag
tctcaggtggaggagtggtgccgagaggtgggcgagctgcaggcgcagacggcggcgctt
ccgctggagcaggcgagcaaggaactggtgggcgagaggcagagcgcggtgggtgaacgc
ctggtgcgcttgctggagcctttgcaggagcgtcgccgcttgctcctggcatccaaggag
ctgcatcaggtggcacacgacctggacgacgaattggcatgggttcaagagcggctgccg
ctggccatgcagacagagcgaggcactggcttgcaggctgtccagcagcacatcaaaaag
aaccagggcctgcggcgggagatccaggctcacgggccgcgcttggaggaggtgctggag
cgcgcgggcgtgctggcctcgctgcgcagcccggaggccgaggcggtgcgccgcggtcag
gagcagctgcagagcgcctggaccggactgcgggaagcgaccgaacggcggcagcagacg
ctggacgccgccttccaggtggaacagtactactttgacgtggctgaggtggaggcatgg
ctgggcgagcaggagctgctcatgatgagtgaggataagggcaaggatgaacagagtacc
ctgcagctgctcaagaagcatttgcaactggaacagggcgtggagaactatgaggaaagc
attgcccaactttcacgccagtgccgggctctactggaaatgggacacccagacagtgag
cagatcagccgtcgacagtcccaagtggatcgcctgtatgtggcgctcaaggagctgggt
gaagagcgcagggtgagcctggaacagcagtactggctataccagctcagccgtcaggtg
gatgagctggaacactggatagcggagaaggaggtggtagctggttcaccggagctgggc
caggactttgaacatgtgtcggtgctacaggagaaattctcagagtttgccagtgagaca
ggaaccgcagggcgggagcggctggcggcggtcaaccagatggtggatgagctgattgag
tgtggccacacagcagcggccaccatggctgagtggaaggacgggctgaatgaggcctgg
gctgaactgctggagctcatgggcactcgggcccagctgcttgctgcctctcgggagctg
cataagttcttcagcgatgcccgagagcttcaagggcagatcgaggagaagaggaggagg
ctgccacgcctgacggcaccacctgagcccagacccagcgccagctccatgcagcggacc
ctgcgagcctttgagcatgacctgcagctcctcgtgtcccaggtaaggcagctacaggaa
ggggcggcccagctgcggacagtgtacgcgggcgagcacgccgaggcaatcgccagccgc
gagcaggaggtgttgcagggctggaaggagctgctggcagcctgtgaggatgctcgtctg
cacgtcagctccacggccgacgccctgcgtttccacagccaggcccgcgacctgctctcc
tggatggacggcatcgcgggccagatcggggcagctgacaaacccagggatgtgtcatcc
gtggaggtgctcatgaactaccaccagggcctgaagacagagttggaggctcgagtgcct
gagctggcagcctgtcaggagctggggcgttctctgctactcaacaaaagcgccatggct
gatgagattcaggcacagctggacaagctaggaagccggaaggaggaggtgtcagagaag
tgggaccggcactgggagtggctgcagcagatgttggaggtacaccagtttgctcaggag
gccgtggtggccgatgcctggctgacagctcaggagccgctcctgcagagccgggagctg
ggcagcagtgtggatgaggtggaacagcttatccggcgacatgaggccttccgaaaagca
gctgcggcctgggaggagaggttcagctctctgcggcgcttgaccacgatcgagaaactc
aaggcagaacagagtaagcagccgcccacccccttgctggggcgcaagttctttggggac
cccacagagctggcggccaaggcagcgcccttgctgcgtccagggggctatgacaggggc
ctggagcctttggcccgcagggcctcggacacgctgtcagcagaggtgcggacccgggtt
gggtatgtgcgccaggagctcaagcccgagcgtcttcagccgcgcattgacaggctaccg
gagaccttggggaaggtagaacccgcggccccaacagccgcagcgttggacacaacggac
acccctgggactccagcggtaatggagcaggtccgaccccggccggagcgccaggagtta
gcggatcgtgcggaggagctgccaaggagacgaagatcagaacgccaggagtccatggat
caaccagaggaggcagcgcggaggcggcggcctgagcgccaggagtctgcggaccacgag
gggccgcacagccttactttgggtcgctatgagcagatggagaggcggcgggagcggcgg
gagcggcggatagaacgacaggaatctagcgaacaggagactcccaccaggggagagctg
gtcaaagggaaggccactctggctgatattgtggagcagcttcaggagaaagaggcaggc
ccagggctccctgctggggtgccgtcgctgcctcagcctcgcgagcttcccccaggtcgc
ctgcccaacgggcttgagccgcccgagcggacacctcggccagatcggccccgggcacgg
gaccggcccaagccgcgccggcggccacggcctcgagagggtggtgagggcgggggaagc
cggcgctcgcgctccgcccctgcccagggaggctccacccccgcgccgccgcctccgccc
actcacacagtgcagcacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgc
aagtcgtccaaccggtcatgggtgagcctgtactgtgtgctcagcaagggggagctgggc
ttctacaaggactccaaaggcccagcttcggggggcacacatggtggggagcccctgctc
aacctgcacaaagccaccagcgaggtggctagtgactacaagaaaaagaaacacgtcttc
aaactccaaacccaggatggcagcgagttcttgctccaggctaaagatgaggaggaaatg
aacggctggctggaggctgtggctaactccgtggcagaacacgccgagatcgcccgatgg
ggccagacgctacctaccacatcctccacagatgagggcaaccccaagcgtgagggcggg
gagcgtagggccagcgggcgccggaagtga
DBGET
integrated database retrieval system
