Mastomys coucha (southern multimammate mouse): 116102012
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Entry
116102012 CDS
T07224
Symbol
Clcn5
Name
(RefSeq) H(+)/Cl(-) exchange transporter 5 isoform X1
KO
K05012
chloride channel 3/4/5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116102012 (Clcn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116102012 (Clcn5)
Ion channels [BR:
mcoc04040
]
Chloride channels
Chloride channel (CLC)
116102012 (Clcn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
116102012
NCBI-ProteinID:
XP_031242064
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Position
X
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AA seq
839 aa
AA seq
DB search
MAMWQGMKSGRLAWPLEHLRTDSSHQLPGAMDNRGFHQGSFSSFQSSSSDEDLMDIPGTA
MDFSMRDDVPPLDREIEGNKSYNGGGVGSSNRIMDFLEEPIPGVGTYDDFNTIDWVREKS
RDRDRHREITNKSKESTWALIHSVSDAFSGWLLMLLIGLLSGSLAGLIDISAHWMTDLKE
GICTGGFWFNHEHCCWNSEHVTFEHRDKCPEWNSWSQLIINTDQGAFAYIVNYFMYVLWA
LLFAFLAVSLVKAFAPYACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLS
LGKEGPLVHVACCCGNILCHCFNKYRKNEAKRREVLSAAAAAGVSVAFGAPIGGVLFSLE
EVSYYFPLKTLWRSFFAALVAAFTLRSINPFGNSRLVLFYVEFHTPWHLFELVPFIVLGI
FGGLWGALFIRTNIAWCRKRKTTQLGKYPVVEVLIVTAITAILAFPNEYTRMSTSELISE
LFNDCGLLDSSKLCDYENHFNTSKGGELPDRPAGVGVYSAMWQLALTLILKIVITIFTFG
MKIPSGLFIPSMAVGAIAGRLLGVGMEQLAYYHHDWGIFNSWCSQGADCITPGLYAMVGA
AACLGGVTRMTVSLVVIMFELTGGLEYIVPLMAAAMTSKWVADALGREGIYDAHIRLNGY
PFLEAKEEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE
SQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPMPPYTPPTLKLRNILDLSP
FTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQMANQDPDSILFN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtggcagggaatgaaatcagggagactggcttggccgctggagcacttgcgc
actgactcatctcaccagctcccaggagccatggataacagagggtttcatcaggggagt
tttagtagcttccagagcagctctagtgatgaagacttgatggacatcccagggactgct
atggacttctctatgagagatgatgtgccacctttagatcgagaaatagaagggaacaag
tcatacaatggtggtggagtaggctcttcaaatagaatcatggacttcttggaggagcca
atccctggtgtagggacctatgatgatttcaacacaattgattgggtgagagagaaatct
cgagacagagataggcaccgagagattaccaataaaagcaaagagtcaacatgggcctta
attcacagtgtgagcgatgctttttctggttggttgttaatgctcctgattggcctttta
tcaggttccttagctggcctgatagacatctctgctcactggatgacagacttaaaagaa
gggatatgcacagggggattctggtttaaccatgagcactgttgctggaattctgagcat
gttacctttgaacacagagacaaatgtccagagtggaatagctggtcccagctcatcatc
aatacagatcagggagcctttgcctacatagtcaattacttcatgtacgtcctctgggct
ctcctgtttgctttccttgctgtatctcttgtcaaggcatttgccccttatgcctgtggt
tctggaatccctgagatcaaaactatcctgagtggtttcattattaggggctatctgggt
aagtggacccttgtcatcaaaactataactttggtgttggcggtgtcatccggcttgagc
ctgggcaaagagggccccctggtgcacgtggcttgctgctgtgggaacatcctgtgccac
tgcttcaacaaatacaggaagaatgaagccaagcgcagagaggtcttatcagctgcagca
gctgctggcgtgtctgtagcctttggggcccctattggtggagtattattcagcctggaa
gaggtcagctactattttcctctcaaaacactatggcgttctttcttcgctgctctggtg
gcagcattcacactccgctccatcaatccatttggaaacagccgcttagttctgttttat
gtggagttccacaccccgtggcatctttttgagcttgtgccattcattgtgctaggcata
ttcggtggcctttggggagctctgtttatccgcacaaacattgcctggtgtcggaagcgt
aaaaccacacagttgggcaagtatcctgtcgtcgaggtactcattgtgacagccatcact
gccatcttggctttccccaatgaatatacccggatgagcacaagcgagctcatttctgag
ctgttcaatgactgcggcctcctggactcctccaagctctgtgattatgagaaccacttc
aacacaagcaaaggcggtgagctgcccgacagacctgctggcgtgggagtctacagtgcc
atgtggcagctggctctaacactcatactgaaaatagtcattactatattcacctttggc
atgaagattccttctggcctctttatccccagcatggctgtcggtgctatagcaggccgt
cttttaggagtcggaatggagcaactggcttattaccaccatgactggggcatcttcaat
agctggtgtagtcagggagctgattgcatcacccctggcctttatgccatggttggggct
gccgcctgtttaggtggggtgactcggatgaccgtttctcttgttgtcataatgtttgaa
ctgactggtggactggaatatattgtgcctctgatggctgcagccatgacaagcaagtgg
gtggcagatgctcttgggcgagagggcatttatgatgcccacatccgtctcaatggatac
ccctttcttgaagccaaagaagaatttgctcataagactctggcaatggatgtgatgaag
ccccggagaaatgaccccttgctgactgtccttacccaggacagtatgactgtggaagat
gtagagaccataatcagtgaaaccacgtacagtggctttccggtggtagtgtctcgagag
tcgcaaagacttgtaggctttgttcttcgaagagatctcattatttcaattgaaaatgct
cggaagaaacaggatggggttgtgagcacttccatcatttatttcacggagcactcacct
ccaatgcctccatacaccccacccaccctgaagcttcggaacatcctggatctcagcccc
ttcactgtgacagaccttacaccaatggagatcgtagtggatatcttccgcaagctggga
ctgcgccagtgcctggttacacacaatgggcgcttacttggaatcattaccaaaaaggat
gtgttaaagcatatagcacagatggcaaaccaagaccctgattccattctcttcaactaa
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