Mastomys coucha (southern multimammate mouse): 116102039
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Entry
116102039 CDS
T07224
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116102039
Membrane trafficking [BR:
mcoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
116102039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
116102039
NCBI-ProteinID:
XP_031242076
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MEPWVPQTQGRTTRPSRDANSGPQSGHYRSRPHPQYGGDKYHQWQDAHTNSKSQQEPRDD
HQQPHYVPRSGEWSQPVSGADYLKGSYPSHLYSRSGYGDPYQRYHTPTPRDEYGYGNYYY
HGHPQLLPEERVARQGSPYIWHEDHGDQRYFSEHHREKRSRTFGANSETQFQLTSKNPYR
DSPASMSGQEPPGEFFPESEAQKQRSLLTSKSNLLQQHESGLSSSSYELSQYMAAAPEEY
EPMVSAAWRPIQADDTSATVPKAPMRFFYVPHVSVSFGPGSQLVCVSPNSPADGQTALVE
VHSMEVILNDFEDQEEMRAFPGPLIREDIHKVDIMTFCQQKAAQCLKSEAPGSRDSALLW
QLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVPSSGTRNLL
TGEIAPSVDTPAQIVEKFTKLLYYGRKKEALEWAMKNHLWGHALFLASKMDPRTYNWVMS
GFTSTLALNDPLQTLFQLMSGRIPQAATCCGDKQWGDWRPHLAVILSNQAGDTELYQRAI
VSMGDTLAGKGLVEASHFCYLMAHVPFGHYTVKTDHLALVGSNHSQEFLKFATIEAIQRT
EIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLASQALHYCEAIGAAVLSQEGSSHPV
LLAELIKLAEKLKLSDPLVLERRRGDLEPDWLVQLRRKHKDLEQNRTGTLRDPASTSSDI
YGVGGTTDIPYPDLSGHQNYSEDSEYSSPLWPTPERTSLSNPITQQPFSLQRDTYAEADG
SGHMGTPVPLYSVPATHLSATSGASGSSVAVTGAPGGRVGEEMLWTHPALGENRMPQEPL
QDPDGLEVISSPQTPPAPRAPSFSEDSAISAKEDEEGSSDGADKPSHSDASQKRKLGDEK
NTKSSGFGWFSWFRSKPASSVSTSGDEDSADSSDSEESSRASPPHHAGLGLSPTPPLPSP
SLPGTGTFSRGTGGSSLQGSSNSSGIAEGVGLGGFSGPQGVSSEFYFQPGTLPPPPTLQG
AVPLFNPSQVPQLPTASSLNRPNRLAQRRYPTQPC
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttgggtgccccagacacaaggaaggaccaccagaccatcaagggatgcaaat
agcggacctcagagtggacattatagatcccgcccacatcctcagtacggtggagataag
tatcaccaatggcaagatgcccacacgaactcaaagtcacagcaggagcccagggatgac
caccaacagcctcactatgtacccaggagtggggagtggtcccagcctgtgtctggagct
gactacttgaaaggatcgtaccccagtcacctgtactcaaggtcaggctatggggacccc
tatcagagataccacactccaacaccgagagacgaatatggttatggtaattactactac
cacggacatccacagctgttgccagaagaaagagtggcaaggcaagggagtccttatatc
tggcatgaagatcatggagaccagaggtacttcagtgagcatcatcgggagaagcgcagt
aggacctttggagcgaacagtgagacccagttccaacttaccagtaagaatccatacaga
gacagccctgcttctatgtctggacaggagccgcctggggaattctttccagagagtgaa
gcccagaaacaaaggtcattgctgaccagcaaatccaaccttctccagcagcatgagtct
gggctcagctctagcagctatgagctcagtcagtacatggcagctgctcccgaggagtat
gaacctatggtgtcggccgcatggaggcctattcaggctgatgacacctcagcgactgtt
cccaaggcacccatgaggttcttctatgttccccacgtgtctgtgagctttgggccagga
agccagctagtatgtgtgtcccccaactctccagctgatggacaaacggcccttgttgaa
gtgcatagcatggaggttatacttaatgattttgaggatcaggaggagatgagagctttc
ccagggccccttattagggaagacatccacaaggtggacatcatgacgttttgtcagcag
aaagcagctcagtgtctcaaatctgaggcaccagggagcagggactcagctctgctttgg
caactgctggttctcctttgtcgacagaacgggtccatggtggggtctgacatcgctgag
ctgctgatgcaggactgcaagaagctggagaagtataagaggcagccccctgtagccaat
ctcatcaacctgactgatgaggactggcccgtgccgagctctgggactcgcaacctgctc
actggggagattgcccccagtgtagatacaccggcgcagatcgtggagaagttcaccaag
ctgctctactatggaaggaagaaggaggccttggaatgggctatgaagaaccacttgtgg
ggccacgccttgttcctagccagtaagatggacccgaggacctacaactgggtcatgagt
ggtttcactagcacgctggcgctcaatgaccctctgcagaccctcttccagctcatgtca
ggaaggattccacaagcagccacgtgttgtggagacaaacagtggggagactggcggccc
cacttggctgtgatcctgtcaaatcaggctggagacacagagttgtaccagcgagcgatt
gtcagcatgggggataccctggctggaaaagggcttgtggaggcatcccacttctgctat
ctcatggctcacgtgcccttcggccactatacggtgaagaccgaccacctggccttggtg
ggcagtaaccacagtcaggagtttttgaaatttgcaacaatcgaggctatccagcggacg
gaaatcttcgagtactgccagatgctgggccgtcccaaatccttcatcccttctttccag
gtgtataagctcctttatgcttcccgtctggcagattatggcctggcatcccaggccttg
cattactgtgaagccattggtgcagctgtcttgagccaggaagggagcagtcaccctgtg
ctattagcggagctcatcaagctcgcagagaaactgaagctgtcagatcccctggtttta
gaaagacgccgcggggacctggaaccagattggcttgtgcaactgcggaggaagcacaag
gacctggagcagaatagaacaggaaccctcagagatcctgcttcgacttcttcggatatt
tatggagtgggaggaacaacagacatcccctatcccgatctctccggccatcaaaactac
tcagaagattctgagtacagctcccccttgtggccaacccctgagcggacaagcctgagc
aatcccatcacacagcagcctttctccctgcagcgagatacctacgcagaggcagatggt
tcaggacatatgggaaccccagtgcctctttactcagttcctgcaacccacttatcagcg
actagtggagccagtggaagcagtgtggcagtgacgggggctcctggaggaagggttgga
gaggaaatgctgtggactcatcctgccttaggagagaacagaatgcctcaagagcccttg
caagatcctgatggtctagaagtcatttccagtcctcagacaccaccggctcccagggct
ccaagtttttccgaggattctgccatttcagccaaggaggatgaggaggggtcttctgat
ggggcagacaaaccatctcactctgatgcttcacagaagagaaagctgggagacgagaag
aatacaaagagctctggattcggctggttcagctggttccgatcaaagcctgctagcagt
gtgtccacctctggagatgaagactctgcggacagttctgactcagaggagtcttccaga
gcatcacctcctcaccatgctggcctgggcctctcaccgacacctcctctcccatcccca
tctctgccaggcactggcaccttctcgagaggcacaggtgggagtagtctccaaggatcc
tcaaacagtagtggaatcgcagaaggcgtggggcttggtggcttctcggggccacagggt
gtttcttctgagttctacttccagcctggtaccctgcctcctccacctaccttgcaaggt
gccgttcctctcttcaacccatctcaggtccctcagcttcccactgctagtagcctgaac
cggccaaaccgcctagcccagcgccgctacccaacccaaccatgctga
DBGET
integrated database retrieval system
