Mastomys coucha (southern multimammate mouse): 116102119
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Entry
116102119 CDS
T07224
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116102119 (Shank1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116102119
NCBI-ProteinID:
XP_031242232
LinkDB
All DBs
Position
Unknown
AA seq
2158 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPQGNRGRGSGAPGNLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGTPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPRDGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGRQESRSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKK
DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQN
VVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKASQQAKRLPPPAISLRSKSM
TSELEEMVSPWKKKIEYEQQPAAVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPGP
GGLASLGKHRPKGFFATESSFDPHHRSQPSYDRPSFLPPGPGLMLRQKSIGAAEDDRPYL
APPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPGSGGP
LPASSPSSFDGPSPPDTRGGGREKSLYHSSALPPAHHHPPHHHHHHAPPPQPHHHHAHPP
HPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTSGAPSPSHHSSSGGSSGPTQAPA
LRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGSLPPASSPTSPALPRSEP
PPAGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPDGAGGGGSSPSPAPATS
PVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDAGDE
DGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESGGSSGGYGAYAAGSRAYGGSGS
SSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSESGGTPQPPPRPPSPRY
DAPPPTLHHHSPHSPHSPHARHEPVLRLWGDPSRRELGYRAGLGSQEKALTASPPAARRS
LLHRLPPTAPGVGPLLLQLGPEPPTPHPGVSKAWRTAPPEEPERLPLHVRFLENCQARPP
PAGTRGSSTEDGPGVPPPSPRRVLPTSPTSPRGNEENGLPLLVLPPPAPSVDVDDGEFLF
AEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPSPATPLPAAPPPAVAAAPPTLDSTASS
LTSYDSEVATLTQGAPAAPGDPPAPGPPAPVAPAPPAPQPGPDPPPGTDSGIEEVDSRSS
SDHPLETISSASTLSSLSAEGGGNTGGVAGGGAGVVSGTELLDTYVAYLDGQAFGGTGTP
GPPYPPQLMTPSKLRGRALGTSGNLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALSAC
SGPSTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLSQPQASAL
ATVKASIISELSSKLQQFGGSSTAGGALPWARGGSGGSTDSHHGGPSYIPERTSSLQRQR
LSEDSQTSLLSKPSSSIFQNWPKPPLPPLPTGSGVSSSTAAAPGATSPSASSASASTRHL
QGVEFEMRPPLLRRAPSPSLLPASDHKVSPAPRPSSLPILPSGPLYPGLFDIRSSPTGGA
GGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDV
ADWLEWLGLSEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgacacagtgccagcgagtgtccc
gaagggggctcagaatcggacagctccccagacgggccaggaagaggcccccaggggaat
cggggccggggcagcggagcacctggtaacctggcctctacccgaggcctccagggacgc
tccatgtctgtccctgacgacgcccacttcagcatgatggttttcaggattggcatccct
gacttgcaccagacgaaatgcctacgcttcaacccagatgccaccatttggacagccaaa
cagcaagtgctctgtgccctgagcgagagtctacaggacgtgcttaactatggactgttc
cagccagccacctcaggccgggatgccaacttcttggaggaggagaggcttctaagagag
taccctcagtcctttgagaaaggggtaccctacctggagttccgctacaagacccgagtc
tacaaacagaccaacctggatgagaaacagctggccaagctgcacacaaagacagggttg
aagaagttcctagaatacgtgcagcttgggacatctgacaaggtggcgaggctgctggac
aaggggctggaccccaactaccatgactcagattcaggagagacacctttgaccctggcg
gcccagactgaaggctcagtagaggtgattcggacactgtgcctgggcggggcgcacata
gacttcagggcccgggatggcatgacagcactacacaaagctgcatgtgctcggcactgc
ctagcactcacggcacttctggaccttgggggctcccccaactacaaggaccgacgaggg
ctgacccccctgttccacacagctatggtggggggagacccccgctgctgcgagctactt
ctgtacaacagggcccagctgggcattgcggatgagaacggctggcaggaaatccaccag
gcctgccaacgagggcactctcagcacctggaacacctgctcttctatggggctgagcct
ggagcccagaatgcctcaggaaacacagccctgcacatctgtgctctctacaacaaggag
acctgtgccaggatcctcctttatcgcggagcaaacaaagatgtgaaaaataacaatgga
cagacacccttccaggtggctgtgatcgctgggaattttgaactgggggaactgattcgt
aaccatcgtgaacaggatgtggtacccttccaggagtcccccaagtatgcagcccggcgt
cggggacccccaggcgcagggctgactgtacccccagcgctgctgagagctaacagcgac
acgagcatggcgctgcctgattggatggtgttttcggccccaggggcctcatcttctggg
acccctggccctacctcaggaccccagggccagtcacagccctcagcccccagcaccaag
ctcagtagtgggaccctcagaagtgccagcagcccccgaggtgcccgggcacgctccccc
tcccgggggagacatcctgaagacgccaagagacaacctcgaggccggcccagctccagc
gggacaccccgagatgggccggctgggggaactgggggctcagggggccctgggggctcc
cttggcagcagaggcagacgtaggaagctctattcagcggtacccggacgctccttcatg
gcggtgaagtcctaccaggctcaaggcgagggggagatctctctgagtaaaggcgaaaag
atcaaagtgctcagcatcggggaaggaggtttctgggaaggccaggtcaaaggtcgagtt
ggctggttcccttccgactgcctggaagaggtggcgaaccgttcccaggagggaagacaa
gaaagccgaagtgacaaggcaaagagactcttcaggcattacacggtgggctcttacgac
agcttcgatgccccaagtgattacatcatcaaggagaagacagtcttactgcagaagaag
gacagtgaggggttcgggttcgtgctccggggggccaaggcgcagacccccatcgaggaa
ttcacccccaccccggccttcccggcgctgcagtacctcgagtctgtggacgagggtggc
gtggcatggcgggctggactacgaatgggagatttcctcatcgaggtgaacggacagaat
gtagtgaaggttggccaccgtcaggtggtcaacatgatccgacagggaggcaacacactg
atggtcaaggtggtgatggtgaccagacacccggacatggacgaggctgtccacaagaaa
gcatcccagcaggctaagcggctcccgcccccagccatctccctgcgttccaagtctatg
acctcagagctggaggaaatggtctccccctggaagaagaaaattgaatacgagcaacag
cctgcagcagtgcccagcatggagaaaaagcggactgtgtatcagatggcactcaacaaa
ctggatgagatcttggctgcagctcagcaaaccatcagcgcaagtgagagtcctgggcct
ggtggcctcgcatccctgggcaagcaccgacccaaaggattctttgccactgagtcgagc
tttgatcctcaccaccgctcccagccaagttatgaccggccttctttcctgcctcctgga
cctggcctcatgctccggcagaaatctatcggggccgcggaagacgacagaccttaccta
gcacccccagccatgaaattcagtcgtagcctctcagtccctgggtcagaggacataccc
ccaccacccactacatccccaccagagccgccctatagcacacctccggccccctcctct
tccggccgcctcactccctctcctcggggagggccctttaaccccggttccgggggtccc
cttcccgcctcctccccttcatctttcgatggtccatctcctcctgacacccgtggtggg
ggcagagagaagagcctatatcacagtagcgccctaccccctgcccaccaccatccacct
catcaccaccatcatcacgccccacccccccagccccaccatcaccatgcacatcctcct
cacccaccggagatggagacaggaggttcccccgacgatcccccacctcgattggccctg
ggaccccagcccagccttcgaggctggcgaggtggaggacccagcccgacctcgggggcc
ccatcaccttctcaccacagtagcagcggaggcagcagcggtcctactcaggctcccgcc
ctgcgctacttccaactgcccccgagggcggccagtgcggctatgtatgtaccagcccgc
tccggccgcggtcgcaagggcccgctggtcaagcagaccaaagtggaaggcgagccccaa
aagggcagcctccctcccgcgtcctctccaacatccccggcgttgcctcggtccgaacca
cctccggccgggccgtcggagaaaaattccatccctatccctaccatcatcatcaaagcc
ccatctaccagtagcagcggccgcagcagccagggaagcagcacagaggctgagcccccc
acccagcccgacggcgcgggcggcggcggatcctcgcctagccctgcacctgccacatcc
cccgtgccgccgtccccgtcgcccgtgcccacccccgcgtcacccagtggcccggccacc
ctggatttcactagccagtttggagcagccctagtgggtgcagcacggagggagggaggt
tggcagaacgaagcccggcggcggtccacgctgttcctgtccaccgacgccggagatgag
gatggaggcgacagcgggctgggcccgggggcgcccccgggtccccggctgcgccattct
aaatccattgatgaaggcatgttctccgccgagccgtacctccggctggagtcggggggc
agcagcgggggctatggggcctacgcagcgggcagccgagcctacgggggcagcgggagc
agcagcgccttcaccagcttcctccctccgcggcccctggtgcatccgctgaccggcaaa
gccttggatcctgcctctcctctggggctggccttggccgcccgggagcgggccttgaag
gagtcctcggagagtgggggcacccctcagccgcctccgagacctccatcaccacgctac
gacgccccaccgcccacccttcaccaccactcgccccattcaccccattcgccacatgcg
cgtcacgagccagtgttgcgcctctggggggacccctcgcgccgggagctggggtaccgg
gcaggtctagggagtcaggaaaaggcccttaccgccagtccacctgcagctcgccgctcc
ctattgcaccgtctgcccccgacggctccgggggtagggccgctcctgctgcagctgggg
ccggagcccccaactcctcaccctggggtgagcaaggcctggcgcaccgcacccccagag
gagcctgagcggctgcctctgcatgtgcgattccttgagaattgccaggcccggcctccg
ccagctggcacgagagggtcctccactgaagatgggcctggggtcccgcctcccagccct
cgcagagtcttgccaacctcccccacttccccgcgaggcaacgaggagaacggccttccg
ctactggtcctgccaccgccagccccttcggtggatgtggacgacggcgaattcttgttt
gcagagccgctgcctccacccctggagttttccaatagcttcgaaaagccagagtcgcct
ctcacacccgggcctccccacccgctgcctgaccctccctcccccgctacccctttaccc
gcagccccacctccggctgtggccgcagcccctcccaccttggactccacagcatccagc
ctgacctcttacgacagcgaagtggccacgttgacccagggggctcccgcagcacctggg
gatcctcctgctcctggcccgccggccccggtagccccagctcccccagcaccgcagcca
ggccctgaccctccacccggcacagattctggaattgaggaggtggacagtcggagcagc
agcgatcatccgctggagaccatcagcagcgcatccacactcagcagcttgtccgccgaa
ggaggaggcaacacagggggcgtggctgggggcggggccggggtagtgagcgggacggag
ctcctggacacctacgttgcctacctggatggccaggccttcgggggcactgggactcct
ggcccaccatatcccccccagctcatgactccttctaagctccggggcagggcgcttgga
actagtggaaatttgagacctggtcctagtgggggacttcgagatcctgtcacccccacc
agccccaccgtctctgtgaccggagctggaacagatgggctactggccttgagtgcttgc
tctggaccctcaacagcaggtgtggcagggggtcccgtggcggttgagccagaagtcccg
cctgtacctttacccactgcctcatccctgcctcggaagctactaccgtgggaggagggt
ccgggaccaccaccaccacccctgccagggcccctgtcccagcctcaggcctctgccttg
gccacggtcaaagccagcatcatcagcgaactcagctccaagctccagcagtttggtggg
tcctctactgcgggaggagctctgccttgggctcggggaggcagcgggggcagcacagac
agccaccacggaggacccagttacatcccagagaggacctcctccctgcagcggcagagg
ctctccgaagactcccagacctctctcctctccaaacccagcagcagcatctttcagaac
tggcctaaaccccctctgccaccactccccaccggatctggggtctcctcttcaacagct
gcagccccaggagctacatccccttcagcctcatctgcctcagcttccaccagacacctt
cagggtgtggaatttgagatgcggcctccgctgctccgccgggcacccagcccctcgctg
ctgcctgcctcagatcacaaggtcagcccagcgcccaggccctcttctttgcccatcctg
ccttcaggacccctctacccgggcctcttcgacatccgtagctctccgaccggaggggca
ggaggctccgctgaccccttcgctcccgtctttgtgccaccacaccccgggatatctggg
ggtcttggaggagccttgtctggggcctctcgctccctatcacccacccgcctgctctcg
ctgcccccggacaagccgttcggcgccaagcctttagggttctggaccaagtttgacgtc
gccgattggctggaatggctgggcttgtcagagcaccgagcccagttcctggaccacgag
attgatggctctcatctgcccgccttgaccaaggaggactatgtggacctgggcgtgacc
agggtgggccaccgtatgaacattgaccgggctctcaaatttttcctggagaggtga
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integrated database retrieval system
