Mastomys coucha (southern multimammate mouse): 116102136
Help
Entry
116102136 CDS
T07224
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03030
DNA replication
mcoc03410
Base excision repair
mcoc03420
Nucleotide excision repair
mcoc03430
Mismatch repair
mcoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116102136 (Pold1)
03410 Base excision repair
116102136 (Pold1)
03420 Nucleotide excision repair
116102136 (Pold1)
03430 Mismatch repair
116102136 (Pold1)
03440 Homologous recombination
116102136 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116102136 (Pold1)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116102136 (Pold1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116102136 (Pold1)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116102136 (Pold1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116102136 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
116102136 (Pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
116102136
NCBI-ProteinID:
XP_031242278
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MDCKRRQGPGSGVPPKRARGGLWDEDEPSPSQFEENLALLEEIEAENRLQEAEEELQLPP
EGTVDGQFSTADIDKRWLRPTLRALDPSTEPLIFQQLEIDHYVGSAPPLPEGPPPSRNSV
PILRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGAEHLNELQQELNAAISRDQRGGKEL
SGPAVLAIELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGVRVPGLGTPSFA
PYEANVDFEIRFMVDADIVGCNWLELPAGKYVPRAEKKKATQCQLEVDVLWSDVISHPPE
GQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCA
PILGAKVQSYEREEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTLKVDRFPFL
GRVTGLRSNIRDSSFQSKQVGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHF
LGEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGV
PLGYLLTRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATL
DFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIKTPTGDEFVKSSVRKGLLPQILE
NLLSARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVT
GFGRQMIEKTKQLVESKYTVENGYETDAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANW
VSSHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSSSDAHDRMDCKGLEAVRRDNCPLVA
NLVTSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHV
ELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQ
LAKPLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLLAFTKRRNCCIGCRSVIDH
QGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYM
RKKVRKDLEDQERLLQRFGPPGPEAW
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaagcggcgacaaggaccaggctctggggtgcccccaaagcgggctcgtggg
ggcctctgggatgaagacgagccttcgccttcgcagtttgaggagaacctggctctactg
gaggagatagaggctgagaatcggctgcaggaggcagaggaggagctgcagctgcctcca
gagggcaccgtggatgggcagttttccactgcagacattgacaaacggtggctgcggccc
accctacgtgccctggatcccagcacagagcccctcatcttccagcagctggagattgac
cactatgtgggctcagcaccacccctgccggaagggcccccaccatcccggaactcagtg
cccatactgagggcctttggggtcaccgatgagggcttctccgtctgctgccacatccat
ggctttgccccctacttctacacccccgcacctccgggttttggggctgagcacctgaat
gagctgcagcaggagctgaacgcagccatcagccgggaccagcgtggtgggaaggagctc
tcagggccggcagtactggctatagagctatgctcccgtgagagcatgtttgggtaccat
ggtcacggcccttctccatttctccgcatcaccctggcactgccccgtcttatggcacca
gcccgacgcctcctggagcagggtgtccgagtgccaggcctgggcaccccgagcttcgca
ccctatgaagccaacgtggactttgagatccggttcatggtggatgctgacattgtggga
tgcaactggttggagctaccagctggaaagtatgttccgagggcagagaagaagaaggct
acccagtgtcagctggaggtggatgtgctgtggtcagatgtgatcagtcacccaccagaa
gggcagtggcagcgcattgcacccctgcgtgtgcttagctttgacatcgagtgtgctggc
cgaaaaggcattttccctgagcctgagcgtgaccccgtgatccagatctgttctctgggg
cttcgctggggcgagccggagccatttctgcgcctggcactcacgctgcggccctgtgcc
cccatcctgggtgccaaagtacagagctatgagcgggaagaagacctgctccaggcctgg
gccaatttcatccttgccatggaccctgacgtgatcaccggctacaacattcagaacttt
gacctcccgtatctcatctctcgggcccaaaccttaaaggtggaccgcttccctttcctg
ggccgtgtgactggtctccgctccaacatccgtgactcctccttccagtcaaagcaggtt
ggccggcgggacagtaaggtggtcagcatggtgggtcgtgtccagatggatatgttgcag
gtgctgcttcgggaatacaagctccgctcctacacgctcaacgccgtgagcttccacttc
ctgggtgagcagaaggaggacgtgcagcacagcatcatcaccgacctgcagaatgggaat
gaacagacgcgccgccgcctggccgtgtactgcctgaaggatgcctttctgccacttcga
ctactcgagcgccttatggtgctggtgaacaatgtggagatggcacgtgtcacaggtgta
ccccttgggtacctgctcacccgtggccagcaggtcaaggtcgtgtctcagctgctgcgc
caggccatgcgccaggggctgctgatgcctgtggtgaagactgagggcggggaggactac
acgggagccacagtcattgagcccctgaaagggtactatgatgtccccattgccaccctg
gacttctcctctctgtacccatccatcatgatggcccataatctgtgctacaccacactg
ctccggcccggggctgcccagaagttgggccttaaaccagatgagttcatcaagacaccc
accggggatgagtttgtgaagtcatctgtgcggaagggcctcctgccccagatcctggag
aatctgctgagtgcccggaagagggccaaggctgagctggctcaggagacagaccccctg
cggcgacaggtcttggatggacggcagctggcactaaaagtgagtgccaactctgtgtat
ggcttcactggtgcccaggtgggcaagctgccatgtttggagatctcccagagtgtcact
gggttcggacggcagatgattgagaaaaccaagcagcttgtggagtccaagtacaccgtg
gaaaatggctatgagaccgatgccaaggtggtctacggtgacactgactctgtgatgtgc
cggtttggcgtctcctctgtggctgaggcaatgtctctggggcgggaggctgcaaactgg
gtatccagtcacttcccatcacccatccggctggagttcgaaaaggtttactttccatac
ctgctcatcagcaagaagcggtatgctggtctgctcttctcctcaagctctgatgcccat
gacagaatggactgcaaaggcctggaggctgtgcgcagggacaactgtcccctggtggcc
aacctcgttacatcctctctgcgccgaatcctcgtggatagggaccctgatggtgcagta
gcccatgcaaaggatgtcatctcagacctgctgtgcaaccgcatagacatctcccagctg
gtcatcaccaaagagttgacccgagcagccgcagactatgccggcaagcaagctcatgtg
gagctggctgagaggatgaggaagcgcgaccccggcagtgcgcccagcctgggcgaccga
gtcccctatgtgatcattggtgctgccaagggtgtggccgcctacatgaagtcggaggac
cccctgtttgtgctggagcacagcctgcccatcgatactcagtactacctggagcagcag
ctggccaagccgctactgcgcatctttgagcccattctgggtgagggccgtgcagagtct
gtgctgctgcgcggtgaccacacacgctgcaaaacggtgctcaccagcaaggtgggcggc
ctcctggccttcaccaagcgccgcaactgttgcattggctgccgctcggtaatcgaccat
caaggagccgtgtgtaagttctgtcagccacgggagtcggagctctatcagaaggaggtg
tcacacctgaatgccctggaggaacgattctcgcgcctctggacacagtgccagcgctgc
cagggcagcttgcatgaggatgtcatctgtaccagccgcgactgtcccatcttctacatg
cgtaagaaggtgcgcaaggacctggaagaccaggaacggctgctgcagcgcttcggacct
cctggccctgaggcctggtga
DBGET
integrated database retrieval system
