Mastomys coucha (southern multimammate mouse): 116102137
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Entry
116102137 CDS
T07224
Symbol
Nr1h2
Name
(RefSeq) oxysterols receptor LXR-beta isoform X1
KO
K08535
liver X receptor beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04148
Efferocytosis
mcoc04931
Insulin resistance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116102137 (Nr1h2)
09160 Human Diseases
09167 Endocrine and metabolic disease
04931 Insulin resistance
116102137 (Nr1h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116102137 (Nr1h2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcoc03310
]
116102137 (Nr1h2)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116102137 (Nr1h2)
Nuclear receptors [BR:
mcoc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116102137 (Nr1h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Fungal_virus_P2_C
Motif
Other DBs
NCBI-GeneID:
116102137
NCBI-ProteinID:
XP_031242280
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MSSPTSSLDTPVPGNGSPQPSTSSTSPTIKEEGQETDPPPGSEGSSSAYIVVILEPEDEP
ERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVHGGAGRYACRGSG
TCQMDAFMRRKCQLCRLRKCKEAGMREQCVLSEEQIRKKKSQKQQQQHPPLPAEPASSSS
ARPAASPGTSEGSSQGSGEGEGIQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLG
ADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLE
TARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIA
INIFSADRPNVQEPSRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVH
SEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccacaagttctctggacactcccgtgcctgggaatggttctcctcagccc
agtacctcctccacttcacccactattaaggaggaggggcaggagactgatccccctcca
ggctctgaagggtccagctctgcctacatcgtggtcatcttagagccagaggatgagcct
gagcgcaagcggaagaagggcccagccccgaagatgctgggccacgagctgtgccgcgtg
tgcggggacaaggcctcgggcttccactacaatgtgctcagttgtgaaggctgcaaaggc
ttcttccggcgaagcgtggtccacggtggggccgggcgctatgcctgtcggggcagcgga
acctgccagatggatgccttcatgcggcgcaagtgtcagctctgccggctgcgcaagtgc
aaggaggctggcatgcgggagcagtgcgtgctttctgaggagcagattcggaagaaaaag
agtcagaagcagcaacagcagcacccaccactcccggcggagccagcatccagtagctca
gcccggcctgcagcctcccctggcacctccgaagggagtagccagggctccggggaagga
gagggcatccagctgacagcagctcaagagctgatgatccagcagttagttgctgcgcag
ctgcagtgcaacaaacgatctttctccgaccagcccaaagtcacgccctggcccttgggt
gcagaccctcagtcccgagatgctcgtcagcagcgctttgcccacttcaccgagctagcc
atcatctcggtccaggagattgtggactttgccaagcaggtgccagggttcttgcagctg
ggccgggaggaccagatcgccctcctgaaggcatccaccattgagattatgttgctagag
acagccagacgctacaaccacgagacagagtgcatcacgttcctgaaggattttacctac
agcaaggatgacttccaccgtgcaggcttgcaggtggagttcatcaatcccatcttcgag
ttctctcgggccatgcgtcgactgggcctggacgatgcagagtatgccttgctcattgcc
atcaacatcttctcagccgaccggcctaacgtgcaggagcccagccgtgtggaggcactg
cagcagccctacgtggaggctctcctctcctacactaggatcaagcggccccaggaccag
ctccgcttcccacgaatgctcatgaagctggtgagcctgcgcaccctcagctctgtacat
tcggagcaggtctttgcattgcggctccaggacaagaagctgccacccttgctgtctgag
atctgggatgtgcatgagtag
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