Mastomys coucha (southern multimammate mouse): 116102157
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Entry
116102157 CDS
T07224
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04115
p53 signaling pathway
mcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116102157 (Cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
116102157 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116102157 (Cop1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116102157 (Cop1)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116102157 (Cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116102157 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_TEP1_C
zf-RING_2
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
116102157
NCBI-ProteinID:
XP_031242367
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAATLVSGGVAPAAGSGG
LGVPGRPVLVAAAVSGSASAGGAVSAGQSRLSCAARPSAGVGGSSSSLGSSSRKRPLLVP
LCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD
NIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANV
NLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEE
MSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGTSQTKKQPWYNSTLASRRK
RLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLY
NGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISW
SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV
KLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGH
RKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACG
SENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIA
ANSQGTIKVLELV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtagccgccaggccggctcgggttccgctgggacgagccccggctcctcggcc
gcctcctcggtgacttccgcctcctcgtccttatcctcgtctccgtcgccgccgtccgtg
gcggcctcggcggcgacgctggtgtccggcggtgtggccccggccgcgggctccggcggc
ctcggcgtcccgggacggcctgtgctggtggcggccgcggtgtctggcagcgcgagcgcc
ggcggggcggtgtccgcgggccagtcccggctgagctgtgcggccaggcccagcgccggc
gttggagggagcagctccagtctcggcagcagcagtaggaagcgacctctgctcgtcccg
ctttgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgtcccatc
tgctttgatatgattgaagaggcatacatgacaaaatgtggccacagcttttgctacaag
tgtattcatcagagtttggaggacaataatagatgtcccaagtgtaattatgttgtggac
aatattgaccatctctatcctaatttcttggtgaatgaactcattctcaaacagaagcaa
agatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatgggcatagg
tggcagatatttcaagatctactaggaactgatcaagataaccttgatttagccaatgta
aacctcatgttggaattattagtgcagaagaagaaacaactggaagcagaatcacatgca
gctcagctacagatccttatggagttcctcaaggttgccagaagaaataagagagagcag
ttggaacagatccagaaggaactaagtgttctggaagaggatattaaaagagtggaagaa
atgagtggcttgtactctcccgtcagtgaagatagcacagtgcctcagtttgaagctcct
tctccatcacacagtagcattattgattctacagaatacagccaacctccaggtttcagt
gggacttctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaag
cgactcactgctcattttgaagacctagagcagtgttatttttctacaaggatgtctcgt
atctcagatgacagtagaacggcaagccagttagatgaatttcaagaatgcttgtccaag
tttactcgatacaactcagtaagaccgttggccacgttgtcttatgctagtgatctctat
aatggttccagcatagtttctagtattgagtttgaccgggattgtgactattttgcaatt
gctggagttacaaagaagattaaagtctatgaatatggcacagtcatccaggatgcagtg
gatattcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttgg
agtagttaccataagaacctgctagccagcagtgattatgaaggcactgttatattatgg
gatggattcacaggacagaggtcaaaggtctatcaggagcatgaaaagagatgttggagt
gttgattttaatctgatggatcctaaacttctggcttcaggttctgatgatgcaaaagtg
aaactgtggtccaccaatttagacaattctgtggcaagcattgaggcaaaggctaacgta
tgctgtgtgaagttcagcccctcctccaggtatcatctggcttttggctgtgcagatcac
tgtgtccactactacgatcttcgtaacactaaacagccaataatggtattcaaaggacac
cgaaaagcagtatcttatgccaagtttgtgagtggtgaagaaattgtctctgcctcaaca
gacagccaactaaaactgtggaatgtgggaaaaccatactgtctacgttccttcaagggt
catattaatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtgga
agtgagaacaactccctctacctgtactataaaggactttctaagactttgctgactttt
aagtttgatacagttaagagtgtgttagacaaagatcggaaagaagatgatacaaatgaa
tttgtcagtgctgtgtgttggcgggcactatcagacggggagtccaatgtgctgattgct
gctaacagccagggtacaattaaggtgctagaattggtataa
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integrated database retrieval system
