Mastomys coucha (southern multimammate mouse): 116102223
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Entry
116102223 CDS
T07224
Symbol
Grin2d
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04020
Calcium signaling pathway
mcoc04024
cAMP signaling pathway
mcoc04080
Neuroactive ligand-receptor interaction
mcoc04082
Neuroactive ligand signaling
mcoc04713
Circadian entrainment
mcoc04720
Long-term potentiation
mcoc04724
Glutamatergic synapse
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05017
Spinocerebellar ataxia
mcoc05020
Prion disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
mcoc05030
Cocaine addiction
mcoc05031
Amphetamine addiction
mcoc05033
Nicotine addiction
mcoc05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116102223 (Grin2d)
04024 cAMP signaling pathway
116102223 (Grin2d)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116102223 (Grin2d)
04082 Neuroactive ligand signaling
116102223 (Grin2d)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116102223 (Grin2d)
04720 Long-term potentiation
116102223 (Grin2d)
09159 Environmental adaptation
04713 Circadian entrainment
116102223 (Grin2d)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116102223 (Grin2d)
05014 Amyotrophic lateral sclerosis
116102223 (Grin2d)
05017 Spinocerebellar ataxia
116102223 (Grin2d)
05020 Prion disease
116102223 (Grin2d)
05022 Pathways of neurodegeneration - multiple diseases
116102223 (Grin2d)
09165 Substance dependence
05030 Cocaine addiction
116102223 (Grin2d)
05031 Amphetamine addiction
116102223 (Grin2d)
05033 Nicotine addiction
116102223 (Grin2d)
05034 Alcoholism
116102223 (Grin2d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116102223 (Grin2d)
Ion channels [BR:
mcoc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116102223 (Grin2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
SH3_YKFC_2nd
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
116102223
NCBI-ProteinID:
XP_031242519
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MRGAGGPRGPRGPAKMLLLLALACASPFPEEVPGPGAAGGGTGGARPLNVALVFSGPAYA
AEAARLGPAVAAAVRSPGLDVRPVALVLNGSDPRSLVLQLCDLLSGLRVHGVVFEDDSRA
PAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEEYD
WTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLGAQLRSVSAQI
RLLFCAREEAEPVFRAAEEAGLTGPGYVWFMVGPQLAGGGGSGVPGEPLLLPGGAPLPAG
LFAVRSAGWRDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRAQNRTHRGESLHRY
FMNITWDNRDYSFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYGRFL
QPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSLVAPRSPPPDAP
RPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI
GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV
AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI
MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGS
TEKNIRSNYPDMHSYMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVT
IGSGKVFATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMS
SKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTHRMDFLLAFSRGMYSCC
SAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGSAAL
ADGFHRYYGPIEPQGLGLGEARAAPRGAAGRPLSPPTTQPPQKPPPSYFAIVREQEPAEP
PAGAFPGFPSPPAPPAAAAAAVGPPLCRLAFEDESPPAPSRWPRSDPESQPLLGGGAGGP
SAGAAAAPPPRRAAPPPCAYLDLEPSPSDSEDSESLGGASLGGLEPWWFADFPYPYAERL
GPPPGRYWSVDKLGGWRAGSWDYLPPRGGPAWHCRHCASLELLPPPRHLSCSHDGLDGGW
WAPPPPPWAAGPPPRRRARCGCPRPHPHRPRASHRAPPAAPHHHRHRRAAGGWDLPPPAP
TSRSLEDLSSCPRAAPTRRLTGPSRHARRCPHAAHWGPPLPTASHRRHRGGDLGTRRGSA
HFSSLESEVPSTSLEKNGN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgccggtggcccccgcggccctcggggccccgctaagatgctgttgctgctg
gctctggcgtgcgccagcccgttcccggaggaggtgccggggccgggcgcggccggcggg
ggcacgggcggggcgcggccgctcaacgtggcgctggtcttctccggcccggcatacgcg
gccgaggcggcgcgcttgggcccggccgtggcggcggcagtgcgcagcccgggcctggac
gtgcggcccgtggcgttggtgctcaacggctccgaccctcgcagccttgtgctgcagctc
tgcgacctgctgtcggggctgcgcgtgcacggcgtggtgttcgaggacgactcgcgcgcg
cccgccgtcgcgcccattctcgacttcctgtcggcgcagacctcgctgcccatcgtggcc
gtgcacggcggcgccgcgctcgtgctcacacccaaggagaagggctccaccttcctacag
cttggctcctccacagagcaacagctgcaggtcatttttgaggtgctggaggagtacgac
tggacatcctttgtggcagtgactacgcgtgccccgggccatcgggccttcttgtcatac
atcgaggtgctgactgatggcagtctggtgggctgggagcatcgaggagcgctgacactg
gaccccggagccggtgaggccgtcctgggcgcacagctccgtagtgtcagtgcgcagatc
cgcctgctcttctgtgcccgcgaggaggcagagcctgttttccgagcggcagaagaagct
ggtctcactgggcctggctacgtctggttcatggtgggacctcagctggccggaggtggg
ggctccggggtccccggggagccccttcttctgccaggaggtgccccactgccggccggg
ctgtttgcagtgcgctctgctggctggcgtgacgacttggcacgtcgagtggctgctggt
gtggcggtggtggccagaggtgcccaggccctgctgcgagactatggcttcctgcctgag
ctaggccatgactgccgcgcccagaatcgcacccaccgcggggagagtctgcacaggtac
ttcatgaacatcacctgggataaccgagactactccttcaatgaggatggttttctggtg
aacccatcactggtggtcatctccctcaccagagataggacgtgggaagtggtgggcagc
tgggaacagcagaccctccgcctcaagtaccctctatggtcccgctatggccgcttcctg
cagccagtggatgacacacagcacctcactgtggccacgctggaggagagaccctttgtc
attgtagagcctgcagaccccatcagcggcacttgcatcagagactcggtcccttgccgg
agccaactcaaccgtacccacagcctggtcgctccccgcagccctccgcctgacgctccc
cgcccggagaagagatgctgcaagggtttctgcattgacattctgaagaggctggcgcac
accatcggtttcagctatgacctctacctggttaccaacggcaagcatggcaagaagatc
gatggcgtctggaatggcatgattggtgaggtgttctatcagcgtgcggacatggccatc
ggctctctcaccatcaatgaggagcggtcagagatcgtggacttctccgtcccttttgta
gagacaggcatcagcgtcatggtggcacgcagcaatggcactgtgtccccttctgccttc
ctcgagccctatagccctgctgtgtgggtgatgatgttcgtcatgtgcctcaccgtggtc
gccgtcacagttttcatctttgagtacctcagtcctgtgggctataaccgaagcctggcc
acgggcaaacgccctggcggctctactttcaccattgggaaatccatctggctgctgtgg
gccctggtgttcaacaactcggtgccagtggagaatcctcggggcaccaccagcaagatc
atggtgctggtgtgggccttctttgccgtcatctttcttgccagctatacagccaatctg
gctgctttcatgatccaggaggagtacgtggacaccgtgtctgggctcagcgaccggaag
ttccagaggcctcaggagcaatacccacccctgaagtttggaacggtgcccaatgggtcc
acggagaagaatatccgaagcaactatcctgatatgcatagctacatggtgcgatacaac
cagccgagagtggaggaggcgctcactcagctcaaggcagggaaactggacgccttcatc
tatgacgcagcagtgctcaactacatggcccgcaaggatgagggctgcaagctggtcacc
atcggctccggcaaggtcttcgccaccactggttatggcatcgccctacacaagggctcc
cgctggaagaggcccatcgacctggcgctgctgcagttcctgggggatgatgagattgag
atgctggagcggctgtggctttcagggatctgccacaatgacaagatcgaggtgatgagc
agcaagctggatatcgacaacatggcaggtgtcttctacatgctcctcgtagccatgggc
ctctctttgctggtcttcgcctgggaacacctggtgtactggcgcctgaggcattgccta
gggcccacccaccgcatggatttcctactggccttctccaggggcatgtacagctgctgc
agcgccgaggctgctccaccaccggccaaacccccgccaccgccgcagccgctgcccagc
cccgcatatcccgctgctcgcccgccccctggccccgcacccttcgtgcccagagagcgc
gcagccgccgaccgctggcgccgggccaagggcacagggcccccggggagcgcagcgcta
gcggacgggttccaccgatactacggccccatcgagccgcaggggctgggcctcggcgag
gcgcgcgcggcacccagaggcgcagccggacgcccactgtccccacccaccacacagccc
ccacagaagccaccaccttcctacttcgccatcgtgcgcgagcaagagccggccgagccc
cccgccggcgccttcccgggcttcccatccccgcccgcgccgcccgccgccgcagccgcc
gccgtcgggccaccactgtgtcgcctggctttcgaggacgagagcccgccggcgccctcg
cgctggccgcgttctgacccggagagccagccgctgttgggcgggggcgcgggcggcccg
agcgcgggggccgcggccgcaccaccgccgcgccgtgccgcgccaccaccgtgcgcctac
ctggacctcgagccttcgccttcggactcggaggactcggagagcctgggcggagcgtcg
ctcggaggcctggagccctggtggttcgccgacttcccctacccgtatgccgagcgcctc
gggccgccacccggccgctactggtcggtcgacaagctcgggggctggcgcgctggtagc
tgggactacctgcccccgcgcggcggccccgcgtggcactgccgccactgcgccagccta
gagctgctaccgccaccacgccatctcagctgctcgcacgacggcctagacggtggctgg
tgggcacctccgccgccaccctgggctgcggggccaccgccccggcgccgggcgcgctgt
ggttgtccgcgaccgcacccgcaccgcccccgggcctcgcaccgtgcgccccccgccgcg
ccgcaccaccaccgacacaggcgcgcggctggcggctgggacctcccgccgcccgcgccc
acctcgcgttcgctcgaggacctgagctcctgcccacgggcggcccccacgcgcaggctc
accgggccctcccgccacgcgcgccgctgcccgcacgctgcgcactgggggccgcccctg
cccaccgcgtcgcaccggagacaccggggcggggacctgggcacacgcaggggctctgcg
cacttctccagcctggagtcggaggtcccttcaacttctctggagaaaaatggaaactga
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