Mastomys coucha (southern multimammate mouse): 116102274
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Entry
116102274 CDS
T07224
Symbol
Slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04082
Neuroactive ligand signaling
mcoc04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116102274 (Slc6a5)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
116102274 (Slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116102274 (Slc6a5)
Transporters [BR:
mcoc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116102274 (Slc6a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
DUF999
Motif
Other DBs
NCBI-GeneID:
116102274
NCBI-ProteinID:
XP_031242640
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All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MDCSAPKEMNKQPANILEAAVPGHRDSPRAPRTSPEQDLPAEAPAAAVQPPRVPRSASTG
AQTFQSAEARACEAQQPGVGLCKLSSPRAQATSAALRDLSEGHSAQANPPSGAAGAGNAL
HCKIPALRGPEEDANVSVGKGTLEHNNTPAVGWVNMSQSTVVLGTDGIASVLPGSVATTT
IPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLMMLA
LAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNVIICYTLFYL
FASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVISDHPKIQIKNSTFCMTAYPNLTMVN
FTSQANKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGIKTS
GKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSL
SAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERKVNIENV
ADQGPGIAFVVYPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSISDEFPKYL
RTHKPVFTLGCCICFFIMGFPMITQGGIYMFQLVDTYAASYALVIIAIFELVGISYVYGL
QRFCEDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYRYPNWSMVLG
WLMLACSVIWIPIMFVIKMYLAPGRFIERLKLVCSPQPDWGPFLAQHRGERYKNMIDPLG
TSSLGLKLPVKDLELGTQC
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggattgcagcgctcccaaggaaatgaataaacaaccagccaacatcttggaggcagcg
gtgccgggccaccgggatagccctcgtgcacctaggaccagccctgagcaggatcttcct
gcggaggcccccgcggccgctgtccagccgccacgtgtgcccaggtcggcttccaccgga
gcccaaactttccagtctgcggaagcgagagcctgcgaggcccagcagcccggagtaggg
ctttgtaaactcagcagccccagggcacaagcgacctccgcggccctccgggacttaagc
gaagggcacagcgcacaggccaatcccccttccggggccgctggggctggcaacgctctg
cactgcaagattccagctctgcgtggcccggaggaggacgcgaacgtgagtgtgggcaag
ggcacactggaacacaacaataccccagccgtgggctgggtgaatatgagccagagcaca
gtggtgttgggtaccgatggcatcgcgtcggtgctcccgggcagcgtggccaccactacc
ataccggaggacgagcaaggggatgagaataaggcccgagggaactggtccagcaaactg
gacttcatcctgtccatggtggggtacgcagtggggctgggcaatgtttggaggtttccc
tacctggccttccagaacgggggaggtgctttcctcatcccttacttgatgatgctggca
ctggctggcttgcctatcttcttcctagaggtgtccctgggccagtttgccagccagggt
cctgtgtctgtgtggaaggccatcccagctctgcagggctgtggcatcgcgatgctcatc
atctctgtcctcatagccatatactacaacgtcatcatctgctacacgctcttctaccta
tttgcctcttttgtgtctgtgctgccctggggatcctgcaacaacccgtggaacacacca
gaatgcaaagataaaaccaaacttttactagattcctgtgttatcagtgaccatcccaag
atacagatcaagaactctactttctgcatgactgcctatccgaacttgacaatggttaac
ttcaccagccaggccaataagacgtttgtcagcgggagcgaagagtacttcaagtacttt
gtgctgaagatttctgcagggattgaatatccgggtgagatccggtggcccttggccttc
tgccttttcttggcttgggtgattgtgtatgcatcgctggcgaaaggaattaagacatca
ggaaaagtggtgtacttcacagccacattcccttatgtcgtcctggtcatcctcctcatt
agaggagtcaccctgcctggagctggagctggcatctggtacttcatcacacctaagtgg
gaaaaactcacggatgccacggtatggaaggatgctgccactcagattttcttctctctg
tctgcagcctggggagggctcatcactctttcttcttacaacaaattccacaacaactgc
tacagggacacgttaattgtaacctgcaccaacagtgccactagcatctttgctgggttt
gtcatcttctctgtcatcggcttcatggccaacgagcgcaaagtcaacattgagaatgtg
gccgaccaagggccaggcattgcatttgtggtttacccagaggccttgactaggctgcct
ctctctccattctgggccatcatctttttcctgatgcttctcacgcttggacttgacacc
atgtttgccaccatcgagaccatcgtgacctccatctcggatgagtttcccaagtatctg
cgcacacacaagcctgtgttcaccctgggctgctgcatctgcttcttcattatgggattc
ccaatgattacacagggtggaatctacatgtttcagcttgtggacacctatgctgcctcc
tatgcccttgtcatcattgccatatttgaacttgttggcatctcctatgtgtatggcttg
cagaggttctgtgaagacatcgagatgatgattggattccagcccaacattttctggaaa
gtctgctgggcattcgtcacaccgaccattttaacttttatcctttgcttcagcttctac
cagtgggagcccatgacctacggctcttaccgctaccctaactggtccatggtgcttgga
tggctgatgctcgcctgctctgttatctggatcccgattatgttcgtgataaaaatgtat
ctggctcccgggagatttattgagaggctgaagctggtatgctcgccacagcccgattgg
ggcccattcttagctcagcaccgtggggaacgctacaagaatatgatcgaccccttggga
acctcgtccctgggactcaagctgcctgtgaaggatttggaactgggcactcagtgctag
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