Mastomys coucha (southern multimammate mouse): 116102336
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Entry
116102336 CDS
T07224
Symbol
Fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116102336 (Fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116102336 (Fan1)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
116102336 (Fan1)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
116102336 (Fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
DUF4363
DUF1771
Motif
Other DBs
NCBI-GeneID:
116102336
NCBI-ProteinID:
XP_031242731
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MTSQRKSPDQKRPRRSLSTSKTTKSQSHSITSYFNSAPPAKLACSICNKMVPRYDLVRHL
DESCANNGDVVQVEPAQTGLMSPTVPTSDLPSIPLEDVTPPKFSPPKRSLIPVQCGSKLG
IQQQTSPYFKDALVCKNQNELPNQSVEIMPLGSLSSKLSRRYVKAKKSLAKNEGLASHCP
QTSLSTPGTSLVDNHPEIEDKDKTLNSSQKENIYSCSPLKEENALEQKGKSSKIVEDESQ
EVSCGEPALTPASSEHSPILLSSDLTLVSNMKSSLGDTLIKQDGTRRIDVGLVDQLEACS
HGEVQMTVDAEVKTLVLGEAESNSPGDDKSTWSNNPELLREAGSVLQRQRACSPLEQGSS
CGVPSVTAQPPLSHPYYLRSFLVVLQALLENEEDMKLFDDQEKGIITKFYELSASGQKLY
VRLFQRKLTWIKMSKLEYEEIASDLTPVVEELKDSGFLQTESELQELSDVLELLSAPELK
ALAKTFHLVSPGGQKQQLVDAFHKLARQRSVCTWGNTQPGIRAVILKRAKDLAGRSLRVC
KGPRAVFSRILLLFSLTDSMEDEEAACGGQGQLSTVLLVNLGRMEFPQYTISRKTQIFRD
REDLIRYAEAAHMLSDISAAMASGNWEDAKELSQRAKRDWDQLKSHPSLRSHEALPLFLR
CFTVGWIYTRISSRAVEVLERLHLYEEAVQELENLLSQKVYCPNSRGRWWDRLALNLHQH
LKRLEEAIRCIREGLADPHVRTGHRLSLYQRAVRLRESPSCKKYKHLFSQLPEVAVGDVK
HVTITGRLCPQHGMGKSVFVIEDGDTTNPTTILCSVEELALDYYRQSGFDQGIHGEGSTF
STLCGLLLWDIIFMDGIPDVFRNAYQASPLDLLTDSFFSSREQALEARLQLIHSAPAESL
RAWVTEAWQAQQGRVASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRRLAADFRHCRGGL
PDLVVWNSQSHHCKLVEVKGPSDRLSCKQMIWLDELQKLGADVEVCHVVAVGAKSKGLG
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacaaagaaagtcacctgatcaaaaaagaccccgtagaagcttatctaccagc
aaaactacaaaaagccaatctcattcgattacttcgtattttaacagtgcaccacctgct
aaacttgcatgttcaatctgtaataaaatggtgcccaggtatgaccttgtccggcacctt
gatgagtcttgtgctaacaacggtgatgttgttcaagttgagcctgctcagactggacta
atgagtccaactgtgcctacatcagatttacccagtattcctttagaagacgtgacacct
ccgaaattctcaccaccaaagagaagtttaatccctgtccaatgtggttcaaaactgggc
atacaacagcagaccagtccctactttaaagatgccttagtgtgcaaaaatcaaaatgag
cttccaaatcagagtgtggaaattatgcctttgggaagtttgtcatcgaaattgtccaga
agatacgtaaaagctaaaaaatcactggcaaagaatgagggactagccagtcattgccca
cagacttctctgtccacacctggcaccagcctggttgataaccatccagagatagaagac
aaagataagactttgaacagttcccaaaaggaaaacatttattcatgttcccctctaaag
gaagagaatgctttagaacagaagggaaagagcagtaaaatagtggaagatgaaagccaa
gaagtttcctgcggggagccagccctcacccctgcatcctcagagcacagccccatttta
ctgtcctcagatttaactctcgtcagtaacatgaaatcctctttgggagacactcttata
aagcaagacggtaccagaaggatagatgtagggcttgttgaccagcttgaggcgtgcagt
cacggagaagtacaaatgactgttgatgctgaggtcaaaacgctggtattgggggaggca
gaatcaaacagcccaggtgatgataagtctacgtggagtaacaacccagagcttcttagg
gaagctggcagtgtcttacagagacaaagggcttgcagccctctggagcaggggtccagc
tgtggtgttcccagtgtgacagctcaacccccactgagtcacccatactacctgaggagc
ttcctggtggtactgcaggccctccttgagaatgaagaagacatgaagctcttcgatgac
caggagaaggggattataactaagttttacgagttgtcagctagtggtcaaaagttgtat
gtgaggctctttcaacgtaaattaacctggattaaaatgagtaaactggagtatgaagag
attgcttccgacttaactcctgtggttgaagaattgaaggactcaggctttctacagaca
gaatctgagctgcaagaactctctgatgtacttgaactcctttctgctcctgagctgaaa
gccctggctaaaaccttccacttggtgagtcccggtgggcagaagcagcagctggtagat
gcctttcacaaactggccagacagcgctcagtctgcacttggggcaacactcagcctgga
atcagagcagtgattttaaaaagagctaaagacttggctggccggtcccttcgtgtctgt
aaaggccccagggctgtgttttcccggatcttgcttctgttctcgttgactgattccatg
gaagacgaagaagctgcttgtgggggtcaaggtcagctgtctactgtgctattggtcaat
ctgggccgaatggagtttcctcagtacaccatcagccggaagacccagatcttcagggac
agagaggatctcatcagatatgcagaagccgcacacatgctgagtgacatctcagctgcc
atggccagtgggaactgggaagacgcgaaggagctttctcagagggcaaaaagggactgg
gaccaactgaaaagccacccttccctgagatcacacgaggccttgccactcttcctgcgc
tgctttactgtcgggtggatttacacaaggatttcctctcgggctgttgaggtcctagag
agactccacctgtatgaggaagctgtccaggaacttgaaaacctcttgtctcagaaagtc
tattgtcccaacagcagaggccgctggtgggatcgcttggctcttaacctgcaccagcac
ctgaagcgcctggaagaggcaattaggtgcatcagggaaggcctggcagatccgcacgtg
aggacaggacaccgactttctctttaccagcgagctgtacgcctgcgagagtctccaagc
tgcaaaaagtacaagcacctcttcagccagctgccggaagttgccgtgggagacgttaag
catgtgaccatcacgggcaggctgtgcccacagcatggcatgggcaagtctgtgtttgtc
attgaggatggagacaccaccaaccccaccacaatcctgtgttctgtggaggagctggcg
ctggattattacaggcagagtggctttgaccaagggattcatggagaaggatccaccttc
agcaccctgtgtggcctcctgctgtgggatatcatcttcatggatggaataccagacgtc
ttcagaaatgcctaccaggcgtccccactggatttgctcacggacagcttcttctcaagc
agggagcaggccctggaagccaggctgcagctgatccacagtgcccctgctgagagcctg
cgggcctgggtaacggaagcctggcaggcccagcaaggcagagtggcttctctggttagc
tgggaccgcttcacttccctgcagcaagctcaggatcttgtctcctgcctcgggggtcct
gtcctcagtggtgtgtgcaggcgcctggctgctgactttcggcactgccgagggggcctc
cctgacttggtggtgtggaattctcagagccaccattgcaagctggtggaagttaaaggc
cccagtgatcgcctttcatgtaaacagatgatctggctggacgaactacaaaagctgggg
gctgatgtagaagtgtgccatgtggttgcagttggtgctaagagcaaaggtcttggctga
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integrated database retrieval system
