Mastomys coucha (southern multimammate mouse): 116102688
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Entry
116102688 CDS
T07224
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
mcoc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116102688
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116102688
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116102688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116102688
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116102688
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116102688
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116102688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
116102688
NCBI-ProteinID:
XP_031243514
LinkDB
All DBs
Position
Unknown
AA seq
1270 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGDF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNTGSSIF
GSKPAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTSTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESVGNKNNSSSNVEDTIVALNMRAALRNGLEGSSEEPSFHDESLQDDRG
ETENNACHIHPAGIVLTKVGYYTIPTMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKAT
SKKLKTAPLPPAGQAATFQMTLNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVPD
SVLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLIDEEDVDAVDQRFGHFPSKAE
TVQEICSPRLPISASHSSKSRSIVGGLLQSKFASGTFLSPSASVQECRTPRTSSLMNVPS
TSPWSVPLPLATVFTVPSPAPEVQLKTVGIRRHPGLVPLEKSITYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLHGPHQLENHQVADSMEYGFLPNPVAVKSLSESPFKVHLEKL
GLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHDYAEWVKKSPRDLL
ELPSKYTSCC
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtggtacagggggctttggcacaaca
tcaacatttggacaaaatactggctttggtactactagtggaggagcatttggaacatct
gcatttggttctagcaacaatactggtggcttatttggaaattcacagaccaaaccagga
ggattatttggtaccagttcatttagccagccagcaacctccacaagcactggttttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagtactggaaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggctttggggatttt
ggaaccagcactagcagcggaggactctttggaactacaaataccacctctaatcctttt
ggtagcacatctggctccctctttgggccaagtagttttacagcagcacctacaggaact
accatcaaatttaatcctcccactggtacagatactatggtgaaagctggagttagcact
aacatcagtaccaagcatcagtgtattactgctatgaaagaatatgagagcaagtcatta
gaggaacttcgtttggaggattatcaggctaaccggaaaggcccacagaaccaagtggga
gcaggtaccacggctggcttatttgggtcttctccagcaacctccagtgcaacaggactg
ttcagctcctccaccactaattcagccttttcatatggtcagaacaaaactgcctttgga
actagcacaactggatttgggacaaatccaggtggtctctttggtcaacagaatcaacag
actaccagtctcttcagcaaaccgtttggccaggctacaaccaccccaaataccggcttt
tcctttggaaataccagcacccttggacagccaagcaccaataccatgggcctatttgga
gtaacccaagcctcacaaccaggaggtctttttgggacagctacaaacactagcactggg
acggcgtttgggacaggaacaggtctctttgggcagcccaatactggatttggtgccgtt
ggttcgaccctgtttggcaataacaagcttacaacttttggaaccagcacgaccagtgct
ccttcatttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttgggtttggcacaaataacactgggagtagtattttt
ggaagtaagccagcagccgggactctgggaactggacttggtacaggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacaaccaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatacttcgacagccattttgggctttggc
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccagcagcacctcaatagtctaacatactcaccttttggagactcccctctcttccgg
aatcctatgtcagatcctaagaagaaagaagagagattgaaaccaactaatccagcagct
cagaaagctcttacaacacctactcattataaacttacacctcgccctgctaccagagtc
aggccaaaggctttgcaaacaacaggtacagccaaatcacatctctttgatgggctggat
gacgatgaaccatctctagcaaacggagcattcatgcctaaaaagagcatcaagaaattg
gttttgaaaaatcttaacaatagcaacctcttttctcctgttaatcatgattcagaagat
ttagcttcaccctctgagtatccagaaaatggagagagatttagcttcctgagcaaacct
gttgatgagaaccatcagcaggatggagatgatgactctcttgtatcacgattttacact
aatcctattgccaaacccattccacaaactccagagagcgttggaaacaaaaataacagt
agcagcaatgtggaagataccattgttgctttgaacatgcgtgctgctctgcgcaatgga
ctggagggaagcagtgaagaaccgtctttccatgatgagtcattgcaggatgaccgaggg
gagacagaaaacaatgcttgccacatacatccagcaggcattgttctcacaaaagttggt
tattatactatcccaactatggatgaccttgctaaaattaccaatgagaagggagaatgc
attgtttctgacttcactattggccgtaaagggtatggctcaatctattttgaaggagat
gtgaatttgacaaatctaaatttggacgatattgtgcatatccggaggaaagaagttatt
gtctatgtagatgataaccaaaagccacctgtgggtgaagggctaaataggaaggctgaa
gttactttagatggagtttggccaacagataaaacatcccggtgtttaataaagagtcca
gatcgacttgctgatatcaactacgaagggagattagaagcagtctcaagaaagcaaggg
gcccagttcaaggagtatcggcctgaaactggttcttgggtgtttaaggtctcccacttt
tctaagtatggccttcaggactctgatgaagaggaggaggaacacccacccaaagctact
tcaaagaagctcaagactgcccctttgccccctgcaggccaggcagccactttccagatg
actcttaatggcaaacctgcacccccacctcagagccagagcccagaagtggagcagtta
ggcagggttgtggagctggacagcgacatggtagacatcacccaggagccagttccggat
tctgtgttagaggagagtgtgcctgaggatcaggagcccgtgtctgcttcaacacatatt
gcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcattgcttatt
gatgaagaagatgtcgatgccgtggatcaacgcttcggtcacttcccttccaaagcagag
actgttcaggaaatctgttctcctagactccccatttcagcctcccactcatcaaaatcc
cgctccatagttggtgggttgctgcaatcaaaatttgcaagtggaacttttctttcacca
agtgcctccgtgcaagaatgtcgcactcccaggacatcatctctcatgaacgtcccatcc
acatccccctggtctgtccctctgcccctggccactgtgttcacagtgcccagcccagcc
cctgaggttcagctaaaaacagtgggaatacgaaggcacccaggcctagtccctcttgaa
aaatccattacgtatggcaaggggaagctcttgatggacatggccctcttcatgggacgt
tcatttcgggttggttggggtcccaactggactcttgctaatagtggagaacaactgcat
ggcccccaccaactggaaaatcatcaggttgctgattctatggaatacggattcctgccc
aatccagtagctgttaaatctctatctgaatccccattcaaagttcatttggaaaaactt
ggcttgagacagaggaagctggatgaagatctgcagttataccagacacctctagagctc
aaattaaaacatagcactgtccatgtagatgagctgtgtcctctcattgtccccaatcct
ggggtctccgtcattcatgattatgcagagtgggttaagaaatcacccagagatttgctg
gaactgccaagtaagtacacatcatgctgctaa
DBGET
integrated database retrieval system
