Mastomys coucha (southern multimammate mouse): 116102739
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Entry
116102739 CDS
T07224
Symbol
Dchs1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04392
Hippo signaling pathway - multiple species
mcoc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
116102739 (Dchs1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
116102739 (Dchs1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116102739 (Dchs1)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Cadherin related
116102739 (Dchs1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_4
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
116102739
NCBI-ProteinID:
XP_031243621
LinkDB
All DBs
Position
Unknown
AA seq
3292 aa
AA seq
DB search
MQKELSVALSCPAMKSLRTLLPLLVLLGATVPGSWGQAGSLDLQIDEEQPAGTLIGDISA
GLPPGTAPPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVTPDGAT
VEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPARDADAGRLGTQGYALSGDG
AGETFRLETRPGPGGAPVPELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL
DINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFS
IDAHTGFLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIF
LSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCV
ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVA
LPGSFVVRVTARDPDQGTNGQVTYSLAPGTHTHWFSIDPTSGIITTAATLDYELEPQPQL
IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD
SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAIDGGGLK
SMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILA
GNSPPLFALDAHSGLLTVAWPLGRRASSVVQLEIGAQDGGGLQAEPTARVNISIVPGTPT
PPIFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLGPVTLTLSGGDPRGLFSLDSPSGLL
KTLRPLDRELLGPVLELEVQAGSGIPPVFAVARIRVLLDDVNDNSPAFPTPEDTVLLPQN
TAPGTPVYTLRALDPDSGANSRVTFSLLAGGDGLFTVDPTTGHVRLMGPLGPPGGPAHEL
EVEARDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA
PDGSPVTYHLAADGASNPFGLESQSGWLWVRTALDRESQELYTLKVMAVSGSKAELGQQT
GTATVRVIILNQNEHSPRLSEGPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTYSLQQ
LSEDSKAFRIHPQTGEVTTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLND
NNPTFLQASGAAGGGLPVQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSL
HPHTGELHTAASLVRAERPHYVLTLSAHDQGSPPRSASLQLLVQVLPSTRMVESPDLIEA
DSAAATVPVVLTVTAAEGLRPGSLLGSVAPQEPASVGVFTYTLVGGADPEGTFALDSASG
RLYLARPLDFEAGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPAFARDPLALALP
ENPDPGATLYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDRETT
PALLLLVEATDRPANASRRRAARVSARVFVTDENDNAPVFASPSRVRLPEDQPPGPAALH
VVARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVVALDHGS
PPRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTY
GGVSGESFSLDPNTGVLTTLRALDREEQEEINLTVYARDRGLPPLLTHVTVRVTVEDEND
HTPTFGNTHLSLEVPEGQDPQTLTTLRASDPDGGLNGQLQYRILDGDPSGAFVLDLTSGE
FGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPE
DAPVGTLLLQLQAHDPDDGDNGRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYT
FSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATL
RAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPAALGPRDRVLFIVATDLGRP
ARSATGVVIVGIQGEPERGPRFPRASNEAVLRENAPPGTPVISPKAVHSGGSNGPITYSI
LSGNERGIFSIQPSTGAITVRSAEGLDFETSPRLRLVLQAESGGAFAFSVLTLTLQDAND
NAPRFLRPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQPARGLFHVDPAT
GTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWELRVS
EDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSIGRYGGRVSLTGPLDFEQCDHYH
LQLLAHDGPHEGHANLTVLVEDVNDNVPTFSQSLYQVMMLEHTPPGSAILSVSATDRDSG
ANGHISYHLASPAEGFRVDPNNGTLFTTVGAMALGHEGPGVVDVVLEARDHGAPGRTAQA
TVHVQLKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEATDADGSRTHATVDYSIISGN
RGRVFQLEPRLAEVGDSVGPGPQALGCLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAV
PVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELMHVEASDADPGPYGLVRFTLSSGDP
LGLFELDENSGALRLARPLDCETQAQHQLVVQAADPAGTHFALVPVTVEVQDVNDHGPTF
PLSLLSTSLAENQPPGTLVTTLHAIDGDAGTFGRLRYSLLEVVSGPEGREAFSLNSSTGE
LRARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFMAPSFHFQVPEGA
QRGHSLGHVQATDEDGGADGLVLYSLTTSSPYFGINQTTGALYLRVDSRAPGSGTTTSGG
GGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAASLG
VVVVLALAALVLGLVRARSRKAEAAPGPMSQTAPIASSSLQKLGREPPSPPPSEHLYHQT
LPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAARGPD
SGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGPPATATAFLGGCGLS
PAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEIARL
KDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAVARAIFPPASHRSPISHEGSLS
SAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSTESGLEPPDDTELRI
NT seq
9879 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggagctgagtgttgcactctcctgccctgccatgaagagcctcaggactctg
ttaccattgctggtgctgttgggggctacagtgccagggagctggggccaggctgggagc
ctggacctacagatagatgaagagcaaccagcaggcacactgattggagacatcagtgcg
gggcttccaccaggcacagcacctcctcccatgtacttcatctctgcccaggagggcagt
ggcgtaggcacagacctcgctattgacgagcacagtggggtggtccgtacagctcgagtc
ctggaccgcgagcggagagaccgttaccgtttcactgcagtcactcccgatggggccacc
gtggaagttacagtgagagtagctgatatcaatgaccatgcgccagctttccctcaggct
cgggctgccctgcagatacctgaacatacagctcttggtacacgctacccactggagcct
gcccgtgatgcagacgccggccgcctaggaacccaagggtatgcactctctggtgatggg
gctggagagacctttcgactggagacacgtcctggtcccggtggagctccagtgcctgag
ctggtaattgctggggaactggaccgggagaaccgctcacactacatgttgcagctcgaa
gcctatgatggtggctcacccccccggagagcccaggccctgctagatgtgacacttctg
gatatcaatgaccatgccccagctttcaatcaaagccgataccatgctgtggtatctgag
agtctggcccctggaagtcctgtcttgcaggtgtttgcatctgatgctgatgctggtgcc
aatggggctgtgacttatgagatcaacaggagacagagtgaaggtgatggacccttctcc
attgacgcacacacagggtttctgaggctggagcggccactggactttgaacaaaggcga
gttcatgaactggtggtgcaggcacgggatggtggggctcacccagagctgggttcagct
tttgtgacggtgcatgtgcgagatgccaatgacaatcagccgtccatgactgtcatcttc
ctgagtgctgatggctccccccgcgtgtctgaggctgccccacctggacagcttgttgcc
cgaatctctgtgtcagatccagatgatggtgacttcgctcacgtcaatgtgtccctagag
ggtggagagggccactttgccctgagcacccaagacagtgtcatctatctggtgtgtgtg
gctcgaaggctggatcgggaggagagggacgtctataacttgcgagtcacagccacggac
tcaggctcacccccccttcgggctgaagctgcctttgtgctacatgtcactgatgtcaat
gacaatgcacctgcttttgatcgccagctctatcgtcctgagcctctgcctgaagttgcg
ttgcctggtagcttcgtggtacgggttactgcccgggatcctgaccaaggcaccaatggt
caggtcacctacagtctggctcctggcactcacactcactggttctccattgatcccacc
tcaggcatcatcaccacagctgccacattagactatgaactagagccccaaccacagctt
attgtggtagccacagatggaggcctgccccctttagtctcctctgccacagttagtgtg
gccttacaggatgtgaatgacaatgagccccaattccagaggactttctacaatgcctca
ctgcctgaaggtacccagcctggaacctgtttcctgcaggtgacagccacagatgctgac
agtggcccattcggcctcctttcctattccttgggtgctgggcttggagcttctggatct
cccccattccgcatcgatgcccacagtggtgatgtgtgtaccacccggaccctggaccgt
gaccagggaccttcaagctttgacttcacggtgacggctatcgatgggggaggcctcaag
tccatggtgtacgtgaaggtatttgtggcagacgagaatgacaacccacctcagttttat
ccacgggagtatgctgccagtctgagtgctcagagcacaccaggcacagctgtgctgagg
gtacatgcccatgaccctgaccagggaccccatggacgactctcctaccacatcctggct
ggcaacagtcccccactctttgcattggatgcacactcagggctgttgacagtagcctgg
cccttaggcagacgagctagttctgtggtgcagctggagatcggggctcaggatggaggt
ggcctgcaagcagaacccactgcccgagtcaacatcagcattgttcctggaacccccaca
ccacctatatttgagcaactgcagtatgttttttcagtgccagaggatgtggcaccaggc
accagtgtgggcatagtccaggcacacaacccaccaggtcgcttggggcctgtgaccctc
accttatcaggtggggaccccagagggctcttctccttagattcaccatccgggctatta
aaaacacttcgccctctggaccgggagcttctaggacctgtcctagagctagaagttcaa
gcaggcagtggaatccccccagtttttgctgtggctcggatccgtgtgctgctggatgat
gtgaacgataactctcctgccttccctacacctgaagacactgtattgttgccacaaaac
actgctccagggactcctgtctatacgcttcgagctctagaccctgactcaggagctaac
agtagagtcacctttagtctacttgctgggggtgatggattgttcactgtggaccctacc
acaggccatgtccgcctcatgggacctctggggcctccagggggaccagcccatgagttg
gaggtggaggcccgggatggaggctccccaccacgcaccagccactttcgacttcgtgtg
gtgatacaggatttgggaatccatgggctggctccacgatttgacagccctacctaccgt
gtggacttgccctcgggcactaccactggaactcagatcttgcaagtgcaggcccaggca
ccagatgggagccctgtcacttaccatcttgcagcagatggagccagtaacccctttggc
ctagagtcacagagtgggtggctgtgggtacggacggcactagaccgtgagtcccaggag
ttgtacactttgaaggtgatggctgtgtccggttccaaagctgaattagggcaacagaca
ggcacagccacagtgagggtcattatcctcaaccaaaatgagcacagtccccgcttgtct
gaagggcccacctttctggctgtagcagaaaatcaacccccaggaaccagtgtaggccga
gtctttgccactgacagagactccggtcctaatgggcgtctgacctacagccttcaacag
ctttcagaagacagcaaggccttccgaatccacccccagactggagaagtgactacactc
caaaccctggaccgagagcagcagagcagcttccagctgctggtgcaagtgcaggatggg
ggtagtccgcctcgcagtgccacaggcactgtgcatgtcgcagtgctcgacctcaatgac
aacaatcctaccttcctgcaggcttcaggggctgctggtgggggcctccctgtacaggta
ccagaccgagtgcctcccggaacactggtgacaactctgcaggccaaagatccagacgag
ggggagaacgggaccatcctatacaccctaactggtcctggctctgagctcttctctctg
catcctcacaccggggagctgcacacagcagcatccctggttagagctgagcggcctcac
tatgtactaactcttagcgctcacgaccagggcagcccccctcgaagtgccagcctccaa
ctgctcgtgcaggtgcttccctcgactcgtatggtggagtcaccagatctcatagaagct
gactcagcggccgcaacagtgcctgtagtactgacagtgacagcagctgaggggcttcga
cctggatccctgttgggttcggtggccccgcaggagccagctagtgtgggcgtattcacc
tatactctggttggtggcgcggaccccgagggcaccttcgcgctggactcagcctcaggt
cgcctgtacttggcgcgtcccttggacttcgaggctgggccggcctggcgcgcgctcaca
gtgcgcgccgaggggccgggaggcgcaggcgcgcggctgttgagagtgcaggtgcgagta
caggacgagaacgagcacgcgcccgcttttgcgcgcgaccccctggccctggcgctacct
gagaaccccgaccccggtgccacgctgtacactttccgtgcatcggatgcggatggccca
ggtcccaacagtgacgtgcgataccgcttgctgaggcaggagcctccggtgcccgccctg
cgcttggacgctcgcaccggggcgctcagcgctcctcgtggtctggatcgggagaccaca
cccgcgctgttactgctggtggaagccaccgaccggccagccaatgccagccgccgcagg
gcagcacgcgtttcggcgcgcgtctttgtcacggatgaaaatgacaacgccccggtcttc
gcctccccatcaagggtgcgcctcccagaggatcagccgcccgggcccgcagcgctgcac
gtggtagctcgggatccagacttgggggaagctgcccgtgtgtcctatcgccttgcggct
ggaggggacggccacttccggctacatgcgaccactggagcgctgtccgtggtgcggcct
ttggaccgtgaacaacgagcagagcacgtactgacagtggtggccttggatcatggttcc
ccgccacgttcatccactcagctcctgaccgtcagtgttgttgatgtcaacgacgaggca
cccgctttccctcagcaggagtacaacgtcatccttcgtgagaacagtccacctggcact
tctctgctcactctgaaggcaactgaccctgaccttggggccaatggacaagtgacttat
gggggtgtctctggcgagagcttctctctggacccaaacactggagttctcacgactctg
agggctctggaccgggaggagcaggaggagatcaatttgacagtatatgcccgggacagg
ggcttgccgccgctgttaacacacgtcacagtgcgagtgactgtggaggatgaaaatgac
cataccccaacttttggaaacacccacctctccctggaagtgcctgaaggccaggacccc
caaacccttaccacactacgagcctctgatccagatgggggactcaatggacagctacag
taccgaatccttgatggggacccttcaggcgcctttgtattagatctcacttctggggag
tttggcaccatgaggccactagaccgggaggtagagccagcattccagctgcagatagag
gccagagatggaggccagccagccctcagtgccaccttgcttgtgacagtgacagtgctg
gatgccaatgaccatgcgccagcctttcctgtgccttcttactctgtggaggtacctgag
gatgcacctgtagggaccctactgctgcaactacaggctcatgacccggatgatggggac
aatggccgtgtgatgtactacctgggtgcaggtacagctggggccttcctgctggagcct
acctctggggaactgagcacagctacagccttggacagagaacactgtgccagctacacc
ttttctgtgaccgcagtggatggtgcagctgctgggcctctgagcactacagtaccaatc
accatcacagtgcgtgatgtcaatgatcatgcaccggctttccccaccagtcctctgcgc
cttcgcctaccccgcccaggccctagcctcaacaaaccaactctggctctggccacgctt
cgagctgaagatcgagatgctggtgccaatgcctccattctataccggctggcaggcaca
ccaccacctggtaccactgtggactcttacactggtgaaatccgtgtggctcgatcccct
gcagctcttggaccccgggatcgagtcctcttcattgtggctaccgaccttggccgccca
gctcgctctgccactggtgtggtcattgttggaatacagggagagcctgagcgtggaccc
cgctttcccagggctagtaatgaggctgtgctccgtgaaaatgcaccaccagggactcca
gttatctccccaaaggctgtccattcaggaggctcaaatggaccaattacgtatagcatt
ctcagtgggaatgagagagggatattctccatccaacctagcacaggagccatcacagtg
cgctcagcagagggactcgactttgagacaagcccacggctacggctggtgctacaggca
gagagtggaggagcctttgctttctccgtgctgaccctgacccttcaagatgccaatgac
aacgctccccgtttcctgcggcctcactacgtggctttcctgccagagtcccgacccttg
gagggacccctgctgcaggtggaagcagatgacctggatcaaggctctggaggacagatc
tcctacagtctggctgcatcccagccagcacggggcttgttccatgtagacccagccaca
ggcactatcacaaccacagccatcctggaccgggaaatctgggctgaaacacggctggta
ctgatggccacagacagaggaagcccagcactggtgggctcagctaccctgacagtgatg
gtcatcgataccaatgacaatcgccccaccatcccccagccctgggagctccgagtgtca
gaagatgcactgttgggctcagagatcgcacaggtgactggaaatgatgtggactctgga
ccagtgctatggtatgtgctgagcccatctggacctcaggatcccttcagtattggccgg
tatggaggacgtgtctccctcacgggacccctggactttgagcagtgtgaccactaccac
ctacagctgctggcacatgatgggccccacgagggccatgccaacctcacagtgctcgtg
gaagatgtcaatgacaatgtacctaccttctcacaaagcctctaccaggtaatgatgctg
gagcacacccctccggggagtgccattctctctgtctctgccaccgacagagactccggt
gctaatggtcacatatcctaccatctggcttctcctgctgagggcttccgtgtcgacccc
aacaatggaactctgttcacaacagtaggggcaatggccttgggtcatgagggaccggga
gtggtggatgtggtgctggaagcccgagaccatggggctccaggccggacagcacaggcc
acggtgcatgtgcaactgaaggaccagaacgaccatgccccaagcttcacattgccacac
taccgtgtcgctgtgtctgaagatttgccccctggttccaccctgctcaccctggaggcc
acagatgctgatggaagccgcacccatgctactgtggactacagcatcatcagtggcaat
cggggccgagttttccagctggaaccccgtctggctgaggtcggggacagcgttggacca
ggtccccaggctttgggttgcctagtgttgcttgagcctctagactttgaaagcctgaca
cagtacaatttaactgtggctgcagctgatcggggacagccaccccgcagttcagccgtg
ccagtgactgtcactgtactggatgtcaatgacaatccacctgtctttacccgagcatcc
taccgtgtgacggtacctgaggacatgcctgttggagctgagctaatgcatgtggaggcc
tctgatgctgaccccggaccttatggccttgtgcgtttcacccttagctcaggcgaccct
ttgggcctctttgagctggatgagaactctggtgctctgaggctggcccgccctctggac
tgtgaaacccaggctcaacatcagcttgtggtgcaggcagctgaccctgctggaacacac
tttgctttggtaccagtgacagttgaggtccaggatgtgaatgaccatggcccaaccttc
ccattgagtctgctcagtactagccttgctgagaatcagcctccaggcactcttgtgacc
acactacatgcaattgatggggatgctgggacttttggtagactccgatatagcctgttg
gaggtagtgtcagggcccgagggtcgtgaggcattttcactgaacagctcaacaggggaa
ttgcgggcacgggtgccttttgactacgagcacacaggaagcttccgtctactcgtgggt
gctgctgatgctgggaatctctcagcgtctgtcactgtgtcagtgctgattactggagaa
gatgaatatgaccctgtattcatggctccgtctttccatttccaagtgccagaaggtgcc
cagcgtggccacagcctgggccatgtgcaggccacagatgaggatggaggtgccgatggt
ctggtgctctactcgctcactacctcttccccctattttggtatcaaccagacaacaggt
gctttgtacttgcgagtggacagtcgggcaccaggaagtggaacgaccacctctgggggt
gggggccggacccgacgtgaagcacctcgggagttaaggctggaggtagtagcaagaggg
cctctacctggatcccggagtgccacagtgcccgtgactgtggatatcacccacactgct
ctaggcctggcgcctgacctcaacttgctattggttggggctgtggcagcctctttggga
gttgtggtggtgcttgccctggccgctctggtcctgggccttgttcgggcacgaagccga
aaggctgaggcagcccctggccctatgtcacagacagcacccatagccagtagctcttta
cagaaactgggtcgggaacctcccagtcctccaccctctgagcatctgtaccatcagact
ctccccagctatggtgggccaggagccggaggtccctaccctcgtggtggctccctggac
ccatcacattcaagtggcaggggctcagcggaggctgcagaggatgatgagatccgcatg
atcaacgagtttccccgtgtggccagtgtggcctcctccctggctgcccgaggccctgac
tccggcatccagcaggatgcagatggattgagtgacacgtcttgtgagcctcctgcccct
gacacctggtacaagggtagaaaggcagggttgctgctgccaggtgcaggagccactctg
taccgagaggaggggcctccggccactgcgacagccttcctggggggctgtggcctgagc
cctgcacccactggggactatggcttcccagcagatgggaagccatgtgtagctggagca
ctgacagccatcgtggctggtgaggaggagctccgtggcagctataactgggactacctg
ttgagctggtgccctcagttccagcctctggccagtgtcttcacagagattgctcggctc
aaggatgaagctcgtccgtgtcctcctgctccccgtattgacccaccacccctcatcact
gctgtggcacacccaggagccaagtctgttcccccaaagcctgcaagcacagctgtagcc
cgggccatcttcccaccagcctcgcaccgatcccctatcagccacgaaggctccctctcc
tcagctgccatgtcccccagcttctcaccctcactgtctcctttggctgctcgctctccc
gttgtctcaccattcggggtagcccagggcccctcagcttcagcactcagcacagagtct
ggcctggagcctccggatgacacagagctgcgcatctaa
DBGET
integrated database retrieval system
