Mastomys coucha (southern multimammate mouse): 116102817
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Entry
116102817 CDS
T07224
Symbol
Arntl
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04710
Circadian rhythm
mcoc04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
116102817 (Arntl)
09159 Environmental adaptation
04710 Circadian rhythm
116102817 (Arntl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116102817 (Arntl)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116102817 (Arntl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
116102817
NCBI-ProteinID:
XP_031243785
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLLSGSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEDKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DNEPDNEGCNLSCLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEDSFVVGGPK
RTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSP
GGKKILNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSN
DEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggatatttcctccacaatcagtgacttcatgtctccgggcccc
accgatctgctctccggttccctgggcaccagtggtgtggactgcaatcgcaagaggaaa
ggcagtgccactgactaccaagaaagtatggacacagacaaagatgaccctcatggaagg
ttagaatatgcagaacaccaaggaaggatcaagaatgcaagggaggcccacagtcagatt
gaaaagaggcgtcgggacaaaatgaacagtttcattgacgaattggcttctttggtacca
acatgcaatgcaatgtcccggaagttagataaactcaccgtgctgaggatggctgttcag
cacatgaaaaccttgcgaggtgccaccaacccatacacagaagcaaactacaagccaaca
tttctatccgatgacgaactgaaacacctaattctcagggcagcagatggatttttgttt
gtcgtaggatgtgaccgagggaagatcctctttgtctccgagtctgtcttcaagatcctc
aattatagccagaatgaccttattggccagagcttgtttgactacctgcatccaaaagat
attgccaaagttaaggaacagctatcttcctcggacactgcgccccgggagcgactcatt
gatgccaagactggacttccggttaaaacggacataacccctgggccctcccgattatgc
tctggagctcgccgctctttcttctgtaggatgaagtgcaacaggccttcagtaaaggtg
gaagataaggacttcgcctccacctgttcaaagaaaaaagcagatcgaaaaagcttctgc
acaatccacagcacaggctatttgaaaagctggccacccacaaagatggggctggatgaa
gacaatgagccagacaacgagggctgcaacctcagctgcctcgtggccatcgggcgacta
cactcacacatggttccacaaccagtgaacggggagatacgggtcaaatctatggagtat
gtttctcgacacgcaatagatgggaaatttgtttttgtagatcagagggcgacagctatc
ttggcatatctaccacaggaacttctaggtacatcatgttatgagtattttcatcaagat
gacatagggcaccttgcagaatgtcacaggcaagttttacagacaagagaaaagatcacg
actaattgctataagtttaagatcaaagatggttcctttatcacactacgaagtcgatgg
ttcagtttcatgaacccgtggaccaaggaagtagaatacattgtctcaaccaacactgtt
gttttagccaatgtcctggaaggcggggacccaaccttcccgcagctaacagcatccccc
cacagcatggacagcatgctgccctctggagaagattcctttgttgtaggtggcccaaag
aggactcatcccactgttccaggcattccagggggaaccagagctggagcaggaaaaata
ggtcgaatgattgccgaggaaatcatggaaatccacaggataagagggtcatcgccttcc
agctgtggctccagcccactgaacatcacaagtacgcctccccctgatgcctcttctcca
ggaggcaagaagattctaaatggagggactccagacattccttccactggcctactacca
gggcaggctcaggagaccccaggttatccctattctgatagttcttctattcttggtgag
aacccccacataggcatcgatatgatagacaacgaccaaggatcaagtagtcccagtaac
gatgaggcagcaatggctgtcatcatgagcctcttggaagcagatgcggggctgggtggt
cccgttgactttagtgacttgccatggccactgtag
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