Mastomys coucha (southern multimammate mouse): 116102826
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Entry
116102826 CDS
T07224
Symbol
Copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116102826 (Copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116102826 (Copb1)
Membrane trafficking [BR:
mcoc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116102826 (Copb1)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116102826 (Copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
Coatomer_g_Cpla
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
116102826
NCBI-ProteinID:
XP_031243824
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMTDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagctgagaacgtgtgctatacgttaattaacgtgccaatggattcagaaccc
ccttctgaaatcagcttaaaaaatgacctggagaaaggcgatgtgaagtcaaagactgaa
gctttgaagaaagtgatcattatgattctgaatggggaaaagcttccgggactcctgatg
acgatcattcgctttgtgctgcctcttcaggatcacaccatcaaaaagttgcttctggtc
ttctgggagattgttcctaaaacaactccagatgggaggctcttacatgaaatgattctt
gtgtgtgatgcatacagaaaggatctccagcatcctaatgagtttattcgtggatctact
cttcgtttcctttgcaaattgaaggaagcagaattgctggagcctttaatgcctgctatt
cgtgcttgtttggaacatcgtcacagctatgttcggagaaacgctgttttggccatctat
accatctacagaaattttgaacatcttatacctgatgctcctgagctgatacatgatttt
ctggtaaatgagaaggatgcaagctgcaaaagaaatgcatttatgatgctaattcacgca
gatcaggatcgagctttggattatttaagtacatgtattgatcaagttcagacatttgga
gacattctacagttggttattgttgaactaatttataaggtctgtcatgctaatccatca
gaaagggcccgtttcattcgctgtatctataatttactacagtcatctagtcctgctgta
aaatatgaagctgctgggacattagtaacactgtcaagtgcaccaactgcaataaaggct
gctgctcagtgttacattgatttaattattaaggagagcgataacaatgtaaagctcatc
gtcctagaccgattggtagaattaaaagagcatcctgctcatgaacgagtcctccaggat
ctggtcatggacatcctaagagtactgagtacaccagacttggaagtacgtaagaaaaca
ctgcagttagcactggatcttgtctcatctaggaatgttgaagagttggtcattgtcttg
aagaaggaagtaattaaaacaaataacgtgtctgagcatgaagacactgacaaataccga
cagcttctcgtgcggacactgcactcctgctctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgctgatgtc
ttggagtttgttcgggaagccattcaacgctttgacaacctgagaatgctgattgtagag
aagatgctggaagtcttccatgctattaagtctgtcaagatttatcgaggagcattgtgg
atcctgggagagtactgcagtacaaaggaagacattcagagtgtgatgactgaggtccgc
aggtcccttggggagatcccaattgtagaatcagaaataaagaaagaagctggcgagtta
aaaccagaagaagagataactgttgggcccgttcagaaattggttacagagatgggcacc
tatgctactcagagcgcactcagcagttccagacctaccaagaaggaggaagacagacca
cccttgagagggttcctcctggacggagatttctttgttgctgcctcccttgccacaact
ctaaccaagattgcattacgctatgtagcattggttcaggagaagaaaaagcaaaactct
ttcgttgctgaggctatgttgcttatggcaactatccttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagaccgaatttccctgtgcctcaaggtctta
tctgaatgctcacctttaatgaatgacatttttaataaggagtgtagacagtctctttcc
caaatgttgtctgccaaactcgaagaagagaaactatcgcaaaagaaagagtctgaaaag
aggaatgtaacagtccagcctgatgaccccatttccttcatgcaactaactgctaagaac
gaaatgaactgcaaggaagaccagttccagctgagtttgctggcagcaatgggtaatact
cagaggaaagaggcagcagatcccctagcgtccaaacttaacaaggtcacacagttgaca
ggtttctctgatccagtgtatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgttcttgttgtaaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctaggggatctgaaacttgtggaaaaaccatctcctttgactcttgctcctcat
gactttgcaaatattaaagctaatgtcaaggtagcatcaacagaaaatggaataattttt
ggcaatatagtttatgatgtctctggagcagcaagtgacaggaactgtgtggtcctcagt
gacatccacattgacatcatggactatatccagcctgctacttgcactgatgctgagttc
cgtcagatgtgggcagaatttgaatgggaaaataaagtgacagtgaacaccaacatgact
gacctgaacgactacttacagcacatcctcaagtcgaccaacatgaagtgcctgactcca
gagaaggccctttctggctactgtggcttcatggcagctaacctatatgctcgttctata
tttggagaggatgcgcttgcaaatgtcagcattgagaagccagttcaccagggaccagat
gcggcagttactggccacataagaattcgtgcaaaaagtcagggaatggccttgagcctt
ggagataaaatcaacctgtctcaaaagaagactagtctataa
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