Mastomys coucha (southern multimammate mouse): 116102920
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Entry
116102920 CDS
T07224
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116102920 (Rbbp6)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116102920 (Rbbp6)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
U-box type E3
116102920 (Rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
116102920
NCBI-ProteinID:
XP_031244044
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKTLVGPPPPSYTCFRCGKPGHYIKNCPTNGD
KNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFL
PEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTC
HQNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMR
SPISRQQDPLMIPVTSSSAHPTSSISSLTSNPSSLAPSVPGNPSSAPAPVPDITATVSIS
VHSEKSDGPFRDSDNKLLPAAALTSEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSL
LHGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHS
ERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSV
PPPGFPPAPANISTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLD
EFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSF
SRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQ
SPTKRNVPQGETEREYFNRYREVPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYE
KYYKGYAVGAQPRPSANREDFSPERLLPLNIRNSPFTRGRREDYAAGQSHRNRNLGGNYP
EKLSTRDSHNPKDNPKSKEKDSENVPGDGKANKHKKHRKRRKGEESESFLNPELLETSRK
SRESSGIDETKTDTLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKVKSDKT
KRKSDGSATAKKDNVLKPSKGPQEKVDGDREKSPRSEPPLKKAKEEATKIDSVKPSSSSQ
KDEKVTGTPRKAHSKSAKEHQEAKPVKEEKAKKDCSKDIKSEKPASKDEKAKKPEKNKLL
DSKGEKRKRKTEEKSVDKDFESSSMKISKVEGTEIVKPSPKRKMEGDVEKLERTPEKDKI
ASSSTPAKKIKLNRETGKKIGNAENTSTTKEPSEKLESTSSKIKQEKIKGKAKRKVAGAE
GSSSTLVDYTSTSSTGGSPVRKSEEKSDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQS
KWDKDDFESEEEDVKTTQPVQSVGKPSSIIKNVTTKPSATVKYTEKESEQSEKIQKLPKE
VSHEMMQHELRSSKGSVSSEKGRAKDRDHSGSEKDNPDKRRSSAQPDKESTVDRLSEQGH
LKNLSQSSKDTRTSEKHESVRGSSNKDFTPGRDKKVDYESRDYSISKRRDERSELTRRKD
SPPRSKESLSGQKSKLREERELPKKGTESKKSNSSPPRDKKPHDHKASYETKRPCEETKS
IDKNSGKEREKHAAEARNGKESSGSKLPCIPNPPDPPIEKELAAGQIEKSTVKPKPQLSH
SSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEEAVASISKDLKEKTTEKAKESVTVA
TASQPGADRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAGSQDSKKKKKKKDKKKHKK
HKKHKKHKKHAGADGDVEKSQKHKHKKKKAKKNKDKEKEKDDQKVKSVTV
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgcactcattcctaaaaattcatctgtgattgtcagaagaattcctattggaggtgtt
aagtctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagacaaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaaactctagtaggtccgccacctccatcttac
acctgctttcgttgtggtaaacctggtcattatattaagaattgcccaacaaatggggat
aagaactttgagtctggtcctaggatcaaaaagagcactggaattcctagaagttttatg
atggaagtgaaagatcctaacatgaaaggtgcaatgcttacaaacactggaaaatatgca
ataccaactatagatgcagaggcctatgcaattgggaagaaagagaaaccacccttctta
ccagaggaaccatcatcatcttcagaagaagatgatcctatcccagacgagctcttgtgc
ctcatctgcaaagacattatgactgatgccgttgtcattccctgctgtggaaacagttac
tgtgatgaatgtataagaacagcacttctggagtcagatgaacatacatgtccaacatgt
catcaaaatgatgtttctcctgatgctttaattgccaacaagtttttacgacaggctgtt
aataactttaaaaatgaaactggctatacaaaaagactacgaaaacagttacctccaccc
ccacccccaataccaccaccaagaccactcattcagcggaacctgcagcctctgatgaga
tctcccatatcaagacagcaggatcctctgatgattccagtgacatcttcctcagctcac
ccaacttcttctatatcttcattaacttcaaatccatcttccttggctccttctgttcct
ggaaatccatcttctgccccagctccagtacctgatataactgcaaccgtatccatatca
gtccattcagaaaaatcagatggaccctttcgggattccgataataaattattaccagct
gccgcacttacatcagaacattcaaagggagcctcttcgattgctattactgctcttatg
gaagaaaaggggtaccaggtgccagtccttggaactccatctttgttgggacagtcatta
ttacatggacagttgatccccacaactggtccagtaagaataaatgctgctcgtccaggt
ggtggtcgaccaggttgggaacattccaacaaacttgggtacctagtttctccaccacag
caaattagaagaggagaaagaagctgttacagaagtataaaccgcgggcgacaccacagc
gaacgatcacagaggactcaaggcccatcactaccagcaactccagtctttgtgcctgtt
ccaccacctcctttgtatccgcctcctccccatacacttcctcttcctccaggtgtacct
cccccacagttttctcctcagtttcctcctggccagcctccaccagcaggatatagtgtc
cctcctccagggtttccaccagctcctgccaatatatcaacaccttgggtatcgtcagga
gtgcagactgcccattcaaataccatccctacaacacaagcacctcctttgtccagggaa
gagttctatagagagcaacgacgactaaaggaagaggaaaagaaaaagtccaagctagat
gagtttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgt
aggcgctcattttccaggtctaaatctccctatagcgggtcatcgtattcaagaagttca
tacacttattcaaagtcaaggtctggctcaacacgttcacgctcttactctcggtccttc
agccgctcacactctcgctcctattcacgatcacccccataccccaggagaggcagaggc
aagagccgcaattaccgttcacggtccagatctcatggataccaccgatctaggtcaagg
tcacctccctatagacgataccactcacggtccagatctcctcaagcatttaggggacag
tctcccactaaacgcaatgtacctcaaggagaaacagagcgtgagtattttaatagatac
agagaagttccacccccttatgacatcaaagcctattatgggcggagtgttgactttaga
gacccatttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtatgag
aagtactacaaagggtatgcagtgggagcgcagcctagaccctcggctaacagagaggac
ttttctccagagagactcttacctcttaatatccgaaattcacccttcacaagagggcgc
agagaagactatgctgctggacaaagtcatagaaatagaaatcttggtggcaactatcca
gaaaaactttcaacaagagacagtcacaatccaaaagataatccaaaatcaaaagagaag
gacagtgagaatgttccaggagacggcaaagcaaacaagcataagaaacacagaaaacga
agaaagggggaagagagtgagagcttcctgaacccagagctactggagacgtctaggaaa
tccagggaatcgtcaggaattgatgagactaagacagatacactttttgttctcccaagc
agagacgatgctacacctgttagggatgaaccaatggatgcagaatctatcactttcaag
tcagtatctgaaaaagacaagagagaaaaggataagccaaaagtaaaaagtgacaagacc
aaacggaaaagtgatgggtctgccacagccaagaaagacaatgttttaaaaccttctaaa
ggaccccaagaaaaggtagacggagaccgtgaaaaatctcctcggtctgaacctccactc
aaaaaagccaaagaggaggctacaaagattgactctgtcaaaccttcttcatcttcacag
aaggatgagaaggtcactggaacccctcgaaaagcccactctaaatctgcaaaagaacac
caggaggcaaagccagtcaaggaggagaaggccaaaaaggactgttccaaagacatcaag
tcagaaaagccagccagtaaggatgaaaaggccaagaagcctgagaaaaataaactactt
gatagcaagggagagaaacgaaagagaaaaactgaagaaaagagtgtagataaagatttt
gagtcatcttcaatgaaaatctctaaagtagaaggaacagaaatagtgaaaccatcacca
aagcggaaaatggaaggtgatgttgaaaagctggaaaggaccccagaaaaggacaagatt
gcatcatcaagtaccccagccaaaaaaatcaaactcaacagagaaactggaaaaaaaatt
ggaaatgcagaaaacacatctactacaaaagaaccctctgaaaaattggagtcaacatct
agcaaaatcaaacaggaaaaaatcaagggaaaggctaaaaggaaagtagctggggctgaa
ggctccagctccacactcgtggattacaccagtacaagttcaactggaggcagtcctgtg
aggaaatctgaagaaaagtcagatacaaagcgaacagtcattaaaactatggaggaatat
aataatgataatacagctcctgctgaagatgttataattatgattcaggttcctcagtcc
aaatgggataaagatgactttgaatctgaagaagaagatgttaaaaccacacaacctgta
cagagtgtagggaaaccatcaagtattataaaaaatgttactactaagccatcagctaca
gttaagtacactgagaaagaaagcgagcagtccgagaaaattcagaagcttcccaaggag
gtgagccatgagatgatgcagcacgagctcaggagctccaaaggctctgtgtccagtgag
aagggcagagccaaggaccgggatcactcagggtcggaaaaggacaaccccgacaagagg
aggagcagtgcccaaccagacaaagagagcactgtagaccgcctgagtgagcaaggacat
ctgaagaatctctctcagtcttccaaagacaccaggacttcagagaagcatgagtctgtt
cgaggttcctcaaataaagacttcactcctggtagggacaagaaagtagactacgaaagc
agagattattccatttccaaacgaagagacgagagaagtgaattaacaagaagaaaagac
tctcctcctcggagcaaagagtctttatctggacagaaaagtaagctgagggaggagaga
gagttacctaaaaaggggaccgagtcgaaaaaaagtaattctagtcccccaagagacaaa
aagcctcatgatcataaagcctcctacgaaactaaacgcccatgtgaagagacaaagtct
atagataaaaactctgggaaggaacgggagaagcatgctgctgaagctcgaaacgggaaa
gagtctagtggcagcaaattgccatgtatacctaaccctccagaccctcccattgaaaag
gagctggctgccgggcagattgaaaagagcaccgtcaagccaaaaccccagttaagtcat
tcctctaggctttcctctgatctaactagagagacagatgaggctgcttttgaaccagac
tataatgagagcgacagtgagagtaatgtgtctgtgaaggaagaagaagctgttgccagt
atctccaaggacttgaaagaaaaaacaacagagaaagcaaaagagagtgtgactgtagca
acagccagccagccaggtgcagacaggagccagagccaaagtagccccagtgttagtcca
agtagaagtcatagcccttctggtagccagacccgaagccacagcagcagtgccagctca
gcagggagccaagacagcaaaaagaagaaaaagaagaaagacaagaaaaagcacaagaag
cataaaaagcacaagaagcataagaagcacgcaggcgcggatggtgatgtggagaagagc
cagaaacataaacacaagaagaaaaaggcgaagaagaacaaagacaaggagaaggagaaa
gatgaccaaaaagtgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
