Mastomys coucha (southern multimammate mouse): 116103078
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Entry
116103078 CDS
T07224
Symbol
Rxrg
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03320
PPAR signaling pathway
mcoc04659
Th17 cell differentiation
mcoc04919
Thyroid hormone signaling pathway
mcoc04920
Adipocytokine signaling pathway
mcoc04928
Parathyroid hormone synthesis, secretion and action
mcoc05200
Pathways in cancer
mcoc05202
Transcriptional misregulation in cancer
mcoc05207
Chemical carcinogenesis - receptor activation
mcoc05216
Thyroid cancer
mcoc05222
Small cell lung cancer
mcoc05223
Non-small cell lung cancer
mcoc05226
Gastric cancer
mcoc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116103078 (Rxrg)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116103078 (Rxrg)
03320 PPAR signaling pathway
116103078 (Rxrg)
04919 Thyroid hormone signaling pathway
116103078 (Rxrg)
04928 Parathyroid hormone synthesis, secretion and action
116103078 (Rxrg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116103078 (Rxrg)
05202 Transcriptional misregulation in cancer
116103078 (Rxrg)
05207 Chemical carcinogenesis - receptor activation
116103078 (Rxrg)
09162 Cancer: specific types
05226 Gastric cancer
116103078 (Rxrg)
05216 Thyroid cancer
116103078 (Rxrg)
05222 Small cell lung cancer
116103078 (Rxrg)
05223 Non-small cell lung cancer
116103078 (Rxrg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116103078 (Rxrg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116103078 (Rxrg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcoc03310
]
116103078 (Rxrg)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116103078 (Rxrg)
Nuclear receptors [BR:
mcoc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116103078 (Rxrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
116103078
NCBI-ProteinID:
XP_031244378
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSVALPTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNLENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaaattattcccacttcatgaagtttcccaccggctttggtggctcccctggt
cacactggctccacatccatgagcccatcagtagccttgcccacggggaagccaatggac
agccaccccagctacacagacaccccagtgagtgcaccccggacgttgagtgctgtggga
acccccctcaatgctcttggctctccctatagagtcatcacttcggccatgggaccacct
tcaggagcattggcagctcctccaggaatcaacttggtggctccacccagctctcagcta
aatgtggtcaacagcgtcagcagctctgaggacatcaagcccttaccaggtctgcctggg
attggaaatatgaactacccatccactagccctgggtctctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtgtacagctgcgagggctgcaaa
ggcttcttcaaaagaaccataaggaaagacctcatctacacctgccgcgataacaaagac
tgcctcatcgacaagcgccagcgcaaccgctgccagtactgtcgctaccagaagtgcctg
gtcatgggcatgaagagggaagctgtgcaagaggaaaggcagaggagccgagagcgagca
gagagcgaggcagaatgtgccagtagcggccatgaagacatgcccgtggagaggattcta
gaagctgaacttgctgtggaaccaaagacagaatcctacggtgacatgaacctggagaac
tcgacaaatgaccctgttaccaatatatgccatgctgcggacaagcagcttttcaccctt
gttgagtgggccaaacgcatcccccacttctcagacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgaattgctgattgcctccttctcccaccgctcggtttcc
gtccaggatggcatcctgctggctacaggcctccacgtccacaggagcagtgctcacagt
gcgggagtcggctccatctttgacagagtcctcacagagttggtgtccaagatgaaagac
atgcagatggataagtcggagctggggtgcctacgggccattgtgctgtttaacccagat
gccaagggtttgtccaacccctctgaggtggagactctccgagagaaggtttatgccacc
ctggaggcctataccaagcagaagtatccagaacagccaggcaggtttgccaagcttctg
ctgcgcctcccagctctgcgctccattggcttgaagtgcctggaacacctcttcttcttc
aagctcattggtgacacccccattgacaccttcctcatggagatgttggagaccccactg
cagatcacctga
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