Mastomys coucha (southern multimammate mouse): 116103213
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Entry
116103213 CDS
T07224
Symbol
Irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04620
Toll-like receptor signaling pathway
mcoc04621
NOD-like receptor signaling pathway
mcoc04622
RIG-I-like receptor signaling pathway
mcoc04623
Cytosolic DNA-sensing pathway
mcoc05160
Hepatitis C
mcoc05161
Hepatitis B
mcoc05162
Measles
mcoc05164
Influenza A
mcoc05167
Kaposi sarcoma-associated herpesvirus infection
mcoc05168
Herpes simplex virus 1 infection
mcoc05169
Epstein-Barr virus infection
mcoc05203
Viral carcinogenesis
mcoc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116103213 (Irf7)
04621 NOD-like receptor signaling pathway
116103213 (Irf7)
04622 RIG-I-like receptor signaling pathway
116103213 (Irf7)
04623 Cytosolic DNA-sensing pathway
116103213 (Irf7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116103213 (Irf7)
09172 Infectious disease: viral
05161 Hepatitis B
116103213 (Irf7)
05160 Hepatitis C
116103213 (Irf7)
05164 Influenza A
116103213 (Irf7)
05162 Measles
116103213 (Irf7)
05168 Herpes simplex virus 1 infection
116103213 (Irf7)
05167 Kaposi sarcoma-associated herpesvirus infection
116103213 (Irf7)
05169 Epstein-Barr virus infection
116103213 (Irf7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116103213 (Irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116103213 (Irf7)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116103213 (Irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
116103213
NCBI-ProteinID:
XP_031244684
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAMAMAEVRGAQRVLFGDWLLGEVSSGQYEGLRWLNEAHTVFRVPWKHFGRRDLDEADAQ
IFKAWAVARGRWPPSGVNLPPPEAEAAERRGWKTNFRCALHSTGRFKLRQDNSGDPADPH
KVYELSLELGSTVGPDMENREEVTPSNGPSTQGVSLGSFLARENAGLQTPSPLLSSDAGD
LLLQVLQYSHILESESGADSVPPQAPGQEQEHISEESYGAWQVEAVPSPRRQHPALMTES
NLGFLDVTIMYKGRTVLHAMVWHPRCVFLYSPMGSAIKTSEPQPVIFPSPAELPDQKQLH
YTETLLQHVSPGLQLELRGPSLWALRMGKCKVYWEVGSPMGTTNPSTPAQLLERNCHTPI
FDFSTFFRELEEFRARRRQGSPHYTIYLGFGQDLSAGRPKEKSLILVKLEPWLCKAHLEG
VQREGASSLDSSSLGLCLSSTNSLYDDIEHFLMDLDQWA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcaatggctgaagtgaggggggcccaacgagtgctgttcggagattggcta
ttgggtgaggtcagtagcggccagtacgaggggctgcggtggctgaacgaggctcacaca
gtcttccgtgtgccctggaagcatttcggtcgtagagatctggatgaagcagatgcacag
atcttcaaggcctgggctgtggcccgagggaggtggccacctagtggagttaacctacca
cccccagaggctgaggctgctgagcgaagaggatggaagaccaacttccgatgtgcactc
catagcacaggacgttttaaattgcgtcaagacaattcaggggacccagctgatccgcac
aaagtgtatgaacttagcctggagcttggatctactgtaggcccagacatggaaaatagg
gaagaggtgacccccagcaatggcccatccacacagggtgtgtccctaggatcattcctg
gcaagagaaaatgctgggctccaaaccccaagccctctgctttctagtgatgctggggac
ctcttgcttcaggttctgcaatacagccatatactggaatctgagtctggggcagactcc
gtccccccacaggctcctggccaagagcaagaacatatttctgaagaatcctatggagca
tggcaggtggaagctgtccccagtcccaggcgtcaacacccagctctgatgaccgagagc
aaccttgggttcctggatgtgaccatcatgtacaaaggccgcacagtgctacatgcaatg
gtgtggcaccccagatgtgtgttcctgtatagccccatgggctcagcaataaaaacttca
gagccccagccggtgatttttcccagccctgctgagctcccagatcagaagcagctgcac
tacacagagactcttctacagcatgtgtctccaggccttcagctggagcttcggggaccg
tcactatgggccctgcgtatgggcaagtgcaaggtgtactgggaggtgggcagcccgatg
ggcaccaccaacccctccaccccagcccagctgttggaacgcaactgccatacccccatt
tttgacttcagcactttcttccgagaactggaggagttccgggctcggaggcggcaagga
tcaccacactacaccatctacctgggttttgggcaagacttgtcagcagggaggcccaag
gagaagagcctgatcctggtgaagctggagccatggctatgcaaggcacacctggaaggc
gtgcagcgtgagggtgcgtcctccctggacagcagcagtcttggcctgtgtttgtctagc
accaatagtctctatgatgacattgaacacttcctcatggatctggatcagtgggcttga
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