Mastomys coucha (southern multimammate mouse): 116103425
Help
Entry
116103425 CDS
T07224
Symbol
Capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04141
Protein processing in endoplasmic reticulum
mcoc04210
Apoptosis
mcoc04217
Necroptosis
mcoc04218
Cellular senescence
mcoc04382
Cornified envelope formation
mcoc05010
Alzheimer disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116103425 (Capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116103425 (Capn1)
04217 Necroptosis
116103425 (Capn1)
04218 Cellular senescence
116103425 (Capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116103425 (Capn1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116103425 (Capn1)
05022 Pathways of neurodegeneration - multiple diseases
116103425 (Capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116103425 (Capn1)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
116103425 (Capn1)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C2: calpain family
116103425 (Capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
116103425
NCBI-ProteinID:
XP_031245244
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MAEELITPVYCTGVSAQVQKQRDKELGLGRHENAIKYLGQDYEKLRARCLQNGVLFQDEA
FPPVSHSLGFKELGPHSSKTYGIKWKRPTELMSNPQFIVDGATRTDICQGALGDCWLLAA
IASITLNETILHRVVPYGQSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEAFEDFTGGVTEWYDLQKAPSDLYQIILK
ALERGSLLGCSINISDIRDLEAITFKNLVRGHAYSVTDAKQVTYQGQRVNLIRMRNPWGE
VEWKGPWSDSSYEWNKVDPYEREQLRVKMEDGEFWMSFRDFIREFTKLEICNLTPDALKS
RTLRNWNTTFYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEEVDDADDYDSRESGCSFL
LALMQKHRRRERRFGRDMETIGFAVYQVPRELAGQPVHLKRDFFLANASRAQSEHFINLR
EVSNRIRLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEE
EIDDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDG
NGKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLNKKLHELIIT
RYSEPDLAVDFDNFVCCLVRLETMFRFFKILDTDLDGVVTFDLFKWLQLTMFA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagttaatcacacctgtgtactgtaccggggtgtcagcccaagtgcagaag
caacgggacaaggagctgggcttgggccgccatgaaaacgccatcaagtatctgggccag
gattatgaaaagctgcgggcgagatgcctgcagaatggggtcctcttccaagatgaggcc
ttccctccagtttctcatagcctgggcttcaaggaactgggtccccattcctctaaaacc
tatggcatcaaatggaagcgtcctacggaactgatgtcaaacccccagttcatcgtggat
ggagccactcgaacagacatctgccagggagcactgggggactgttggctcctggctgcc
attgcctccatcaccctcaacgagactattctgcaccgagtggttccctacggccagagc
tttcaggacggctacgctggcatctttcatttccagctgtggcagttcggggagtgggta
gacgtggtcgtggatgacctgctgcccaccaaggatgggaagctggtgtttgtgcactct
gcccaaggcaatgagttctggagtgctctgcttgagaaagcctatgctaaagtgaatggc
agctacgaggccctttcgggaggcagcacctcagaggccttcgaggactttaccggtggg
gtcactgagtggtacgatctgcagaaggcaccaagtgacctctaccagatcattctaaag
gccctggaacgaggctccttgctgggctgctccattaatatctctgatatccgtgatttg
gaggcaatcacttttaagaacctggtgagaggccatgcatactctgtgacggatgccaag
caggtgacttaccagggccagcgggtgaacctaatccggatgcggaacccctggggtgaa
gtggagtggaaaggaccatggagtgacagctcctatgagtggaacaaagtggacccctat
gaacgagagcagctgagggtcaagatggaggatggggagttctggatgtccttccgagac
ttcatacgtgagttcaccaaactggaaatctgcaaccttacacctgatgccctcaagagc
aggaccctccggaattggaacaccacattttacgagggcacctggcgccggggaagcact
gccggaggctgcaggaactatcccgccaccttctgggtaaacccccagttcaagatccgg
ttggaggaagtagatgatgcagacgactatgacagccgagagtcaggctgcagcttcttg
ttggccctcatgcagaagcaccgccgcagggagcgccgcttcggccgggacatggagacc
atcggctttgcagtgtaccaggtccctcgggagttggctggtcagcctgtgcacttgaag
cgtgacttcttcctggccaatgcttctcgggcacaatcagagcacttcatcaaccttcga
gaagtcagtaaccgcatccgcctgccgcccggggagtatatagtggtgccctccaccttc
gagcccaacaaagagggtgactttctgctgcgcttcttttcagagaagaaggctgggacc
caggagctagatgaccagatccaggccaatctccccgatgagaaagttctctctgaagag
gagatcgatgacaacttcaaaaccttgttcagcaagttggcaggggatgacatggagatc
agcgtcaaggagttgcagaccatcttgaacaggatcattagcaaacacaaagacctgcgc
actaatggcttcagcctggagtcatgccgcagcatggtgaacctcatggatcgagatggc
aatgggaagctgggcctagtggagttcaacatcctgtggaaccgcattcgaaattacctg
accatcttccggaagtttgacctggacaagtctggcagcatgagtgcctacgagatgagg
atggccatcgaggccgcaggcttcaagcttaacaagaagctgcatgagctcatcatcacg
cgctactcagagcccgacctggccgtggacttcgacaactttgtgtgctgccttgtgaga
ctggagaccatgttccggtttttcaaaattctggacacagacctggatggtgttgtgacc
tttgatctatttaagtggttacagctgactatgtttgcatga
DBGET
integrated database retrieval system
