Mastomys coucha (southern multimammate mouse): 116103443
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Entry
116103443 CDS
T07224
Symbol
Atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04136
Autophagy - other
mcoc04140
Autophagy - animal
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05016
Huntington disease
mcoc05017
Spinocerebellar ataxia
mcoc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116103443 (Atg2a)
04136 Autophagy - other
116103443 (Atg2a)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116103443 (Atg2a)
05014 Amyotrophic lateral sclerosis
116103443 (Atg2a)
05016 Huntington disease
116103443 (Atg2a)
05017 Spinocerebellar ataxia
116103443 (Atg2a)
05022 Pathways of neurodegeneration - multiple diseases
116103443 (Atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116103443 (Atg2a)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116103443 (Atg2a)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
116103443 (Atg2a)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116103443 (Atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
116103443
NCBI-ProteinID:
XP_031245274
LinkDB
All DBs
Position
Unknown
AA seq
1914 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLQHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLETWSVN
EVLRSMESPLELVEGFVSSIEAAVPWAALLTDHCTVCVSGLQLTLQPRQGSGPGAADAQS
WASCMTTSLQMAQECLREGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLNTVVRVEH
SLGDEERRVAVEVRVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQLSGVCLYFEELP
SQVDPPQPPLQIGSCTGYMELMVKLKQNEAFPGPKLEVSGQLGSLHLLLTPHQLQQLQKL
LSAVNLADPGGLADKLNKSRPLGAEDLWLIEQDLNQQLQAGVVAESLSLYPISNPLNLDS
ADLFFSMAGLTSSVTSAVSELSVYSVDLGSSVHSNMAFHRPSTPTHSGGKAAPTPLLDTM
RPDSLVKMTLGGVSLTLLQTASPSSGPPDLTTHFFAEFDAAKDGPFGSRDFSHLRPRFQR
ACPCSHVRLTGTAVQLSWELRTGGHSRRTSTTEMHFGQLEVLECLWPRAASEPEYTEILS
FPSHSGSKASARPCAHLRHTQTLRRVLKSRSRRSTACHCHSELSLDLADFQADVELGSLD
RLAALLHQITTPSEPPAGLLTEPPQATEQQTVFRLSAPRATLRLRFPIPDLRPERDPWAG
QAVRAEQLRLELSEPQFRSELNSGPGPPAPTRLELTCSDLQGIYEDGEKPPVPCLRVSKA
LDPKSTEAKYFLPQVVVTLNPQSSGTQWETASEKGRDLELSTESPCELQQPEPSPFSSKR
TMYETEEMVIPGDPEEMRTFQSRTLALSRCTLDVIMPSAHIFLPSKEIYESIYNRINNDL
LMWEPADLLPTSTAAARPPGSSGFKMCKSAFKLDSDSDEDDTQFFSMASGVSQTPASEPS
HRLSQSTFSTLVTVLKGRITVLCEAKDETGKRLDGTHGELVLDVEQGTIFSVAQYRGQPG
LGYFCLEAEKATLYHRAAIEDYPLPNHLEVPSFAPPAQLAPTIYPSEEGVTERGTLGRKG
QGPPMLSAAVRIHLDPHKNVKEFLVTVRLHKATLRHYMALPEQSWHSQLLDFLDVLDDPV
LGYLPPTVITILHTHLFSCAVDYRPLYLPVRVLVTAETFTLSSNIVMDTSTFLLRFILDD
SALYLSDKCEVESLDLRRDYVCVLDIDLLELVIKTWKGSTESRLSQPLFELRCSNNVVHV
HSCADSCALLVNLLQYLTSSGDLHPPPRPPSPTEIAGQKLSESPASLPSCLPVETALINQ
RDLTDALLDTERRSLRELAQSSGGPLPQASPISVYLFPGERSGAQAPLPPPGGCSHTLAS
KAKEHENEEEGDGDTLDSDEFCILDAPGLGIAPRDGEPIVTQLHPGPIIVHDGHFSQPLG
STDLLRAPAHFPVPSSRVVLREVSFIWHLYGGRDFGLHPTYRARVGLSGPRVSPSRSSGP
NRPQNSWRTQGGIGRQHQVLMEIQLSKVSFQHEVYPEESAIVGGLGQELDERPLSRQVLI
VQELEIRDRLATSKINKFLHLHTSERLPRRTHSNMLTIKALHVAPTSSVGGPECCLRVSM
MPLRLNVDQDALFFLKDFFTSLAASINPMVPGDTSEAPRETHSRPSSPQEGQSEDTETAS
SPQDAPGSSHSSSDQQPIYFREFRFTSEVPICLDYHGKHVTVDQVGTFMGLLIGLAQLNC
SELKLKRLCCRHGLLGVDKVLCYALHEWLQDIRKNQLPGLLGGVGPMHSVVQLFQGFRDL
LWLPIEQYRKDGRLIRGLQRGAASFGSSTASAALELSNRLVQAIQATAETVYDILSPAAP
ISRSLQDKRSSRKLRRGQQPADLREGMAKAYDAVREGILDTAQTICDVASRGHEQKGLTG
AVGGVIRQLPPTVVKPIIVATEATSNVLGGMRNQILPDAHKDHALKWRLEEAQD
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccatggtcgaactgtgtgaaagagcgtgtctgccgctacttg
ctacagcactacttgggtcacttctttcaggagcacctcagcctggatcagctcagcttg
gatctgtacaagggcagcgttgccctgagggatattcacctggaaacctggtcggtgaac
gaggttttgaggtcaatggagtcaccactggaactggtggaaggcttcgtgagctccatc
gaggcagctgtcccctgggctgcacttctcactgaccactgcactgtgtgtgtgtcgggc
cttcagcttaccttgcagccccgccagggttcaggaccaggggctgcggacgctcagagt
tgggcctcatgcatgaccacaagcctgcagatggctcaagagtgccttcgggaagggtta
ccagaaccctcagaaccaccacagcccctggaggggctggaaatgtttgcacagaccata
gagactgtgcttcggaggatcaaggtgaccttcctgaacacagttgtgagggtggaacat
tcactgggtgatgaggaacggcgcgtggctgtggaggtccgagtgcagagactggagtac
tgtgacgaagcggtgcgagacccgagccaggccccacctgtggacgtgcaccagccgcct
gccttcctgcacaagctcctgcagctgagtggggtctgcctgtactttgaggagctgccc
tcccaggtggacccgccacagccgcctctgcagatcggcagctgcacagggtacatggag
ctcatggtgaagctgaagcagaacgaggccttcccaggccccaagttggaggtatcggga
caactgggatccctgcacctactcttgaccccgcatcagctccagcagctccagaagctg
ctcagtgccgtcaacctcgcagaccctggaggcctggctgacaagctgaacaagagtcgc
ccactaggtgctgaagatttgtggctcattgagcaagatctgaaccagcagctgcaggcg
ggtgttgtggctgagtccctcagcctgtaccccatcagcaaccccctcaatttggacagc
gcagacctcttcttctccatggctggcctcacaagcagtgtgacctcggctgtctctgag
ctctccgtgtatagtgtagacctgggctcctctgttcacagcaacatggccttccaccga
ccctcaacccccacccactcaggtggcaaagcagccccgactccccttctggacaccatg
cgccccgactcactggtgaagatgaccttgggaggtgtgagcctgaccttgcttcagaca
gcttccccatcttcaggaccacccgacctcaccacccacttttttgctgagttcgatgct
gccaaagatgggcccttcggctcccgggacttctcccacctccggccgcgcttccagagg
gcctgcccttgtagccatgtccggctaacgggcacagctgtgcagctgtcctgggagctt
cgcacaggtgggcacagccggagaacaagcaccactgaaatgcacttcggacagctggag
gtgctggagtgcctgtggcccagggccgcctcagagccagagtacaccgagatcctgagc
ttccccagtcactctggctccaaagcctccgctcgaccctgcgcccatctgcgccacaca
caaacccttcgccgggtgctcaagagccggtcccggcgctccactgcctgccattgtcac
tcagaactgtccctggacctggcggacttccaagctgatgtggagctggggtccctggac
cgccttgctgccttgctccatcaaatcaccacaccctctgagccacctgctggcctacta
acagagcccccacaggccactgagcagcagacagtgtttcgtctctcagcaccccgggct
accctgaggctacgcttccccatcccagacctacggcctgaacgggacccctgggctggt
caggctgtgcgggctgagcagctgcggttggagctgagtgagccccagttccgctcagag
ctcaacagtgggcctggccccccagctcctacccgcttggaacttacttgttcagacctg
caaggaatctacgaagatggagagaagccaccagtcccctgcctgcgggtctccaaagct
ctggatcccaagagtactgaggccaagtactttctacctcaggtagtggtgaccctgaac
ccccagtccagtggcacacagtgggagacagcctctgagaaaggccgggatctagagctg
tccaccgagagtccatgtgagctacagcagcctgagccctcgcccttctcctccaagcgg
accatgtacgagactgaggaaatggtgatccctggagaccctgaggagatgaggacattc
cagagccggacgctggcactgtcccgctgtaccctggatgtgatcatgcccagtgcccac
atcttcctgcccagcaaggaaatctacgaaagcatctataacaggatcaacaacgacctg
ctcatgtgggagcctgccgacttgcttcccacatccactgctgctgctcggccacctggc
tcttcggggttcaagatgtgcaagtcagccttcaagctagactcggattcggatgaagac
gacacccagttcttctcgatggcatcaggtgtctcccagactcctgcctcggaaccttcc
catcgtctgtcccagagtaccttctccacactggtgacagtgctaaagggtcggatcact
gtgctctgtgaggctaaggatgagacggggaagcggctggatggcactcacggggagctg
gtactagacgtggagcaaggcaccatcttcagcgtagcccagtaccgaggccaaccaggg
cttggctacttctgcctggaagctgaaaaggcaacactctaccatcgagcggccattgag
gactacccactgcccaatcacttggaagtacccagctttgctcccccagctcagctggct
ccaaccatctatccatcagaggaaggggtgactgagcggggaaccttgggccgcaagggc
cagggtccccccatgctgtctgcagctgtccgcatccacctggacccccacaagaatgtc
aaggaatttttggtgacagtacggctgcacaaagccactctacgccactacatggccctc
cctgaacagagctggcactctcagctcctggacttcttggatgtactggatgaccctgtg
ctggggtacctgcccccaacagttatcactattctgcacacacacctcttctcctgtgct
gtggactacaggcccctctacctccctgtgcgcgtcctggtcactgctgagaccttcacc
ctctccagcaacattgtcatggacacctccaccttcctgctcaggttcatcctcgatgac
tccgctttgtacctgtctgacaagtgtgaggtggagagcctggatctgcggcgagattat
gtctgcgtcctggacattgacctcctggagcttgtaatcaaaacctggaagggcagcacc
gagagcagactgagccagccactgttcgagctgcgctgctccaacaatgtggtgcatgtg
cacagctgtgctgactcctgcgccctgctggtcaacctgctccaatacctaaccagctcg
ggcgacctgcaccccccaccccggccccccagccctacggagatcgccggacaaaagctc
tcggagagccctgcctccttgccctcatgcctaccagtggagacagccctcatcaaccag
cgagacctgactgatgcccttctggacactgaacggcgtagcctgcgggagctggcccag
tcatcgggtggcccacttcctcaggcctctcccatctccgtctatctgttcccaggtgaa
cggagtggggcccaggcccctttgccgcctcctgggggctgttctcataccttggcttct
aaggcaaaggaacatgagaatgaagaggaaggggatggagacaccctggacagcgatgag
ttctgcatccttgatgcccctggcctaggcattgcgccccgagacggggagcccatcgtg
acacagctgcatccaggccccatcatcgtgcatgatggtcacttctcccagcccctggga
agcactgacctgttgcgtgcgcctgcccacttcccagtgcccagcagccgtgtggtactt
cgggaggtctccttcatctggcacctctatgggggtagagactttggccttcaccccact
tacagagcaagagtaggcctcagtggccccagggtatcaccttcccgatcctctggtcct
aaccggccccagaactcctggcgtacccagggtggcattggacggcaacaccaggtcctc
atggagatccagctcagcaaagtgagcttccaacatgaagtgtacccagaagagtcagcc
atagttgggggcctgggccaggagctggatgagcgaccactgtcccgtcaggtgctcatt
gttcaggagctagagatccgagaccggctggccacctccaagatcaacaagttccttcat
ttgcacacgagtgaacggctgccacggcgcacacactccaacatgcttaccatcaaggca
ctgcatgtggctcccaccagcagcgtaggagggccagaatgctgtcttcgagtctccatg
atgcctctgaggctcaatgtggaccaggacgccctcttcttcctcaaggactttttcacc
agcctagcagccagcatcaaccccatggtcccaggggatacttccgaggctccccgagag
acccacagccggcccagcagcccccaggaggggcagtctgaggacacagagacagccagc
agcccacaggatgctccaggcagtagccacagctcctctgaccagcagcccatctacttc
agggagttccgcttcacctctgaggtgcccatctgcctggattaccatggcaagcatgtc
actgtggaccaggtgggcactttcatgggactcctaattggcctggcccagctcaactgc
tccgagctgaagctcaagaggctttgctgccggcatgggctcctgggtgtggacaaggtg
ctctgctatgccctccatgaatggctgcaggacatccgcaagaaccagctgcctggcctg
ctgggaggcgtgggtcccatgcattcagttgtgcagctcttccaagggttccgggacctg
ctgtggctacccattgagcagtacagaaaagatggccgcctcattcgggggctgcagcgt
ggggctgcctcctttgggtcatccacagcctctgctgctctggaactgagcaacaggctg
gtccaggccatccaggctacagctgagacagtatatgacatcctgtcccccgcggctccc
atctcccgatccctacaagacaagcgttcttcacggaaactacgcagaggtcaacaacct
gctgacctccgggaaggcatggctaaggcttatgatgctgtccgagagggtatcctggat
acagctcaaaccatctgtgatgtggcatcaaggggccatgagcagaagggcctgacaggt
gccgtgggaggcgtgatccgacagctccccccaactgtggtaaaaccaataattgtggcg
acagaggcaacatccaacgtgctagggggcatgcgcaaccagatccttccagatgcgcac
aaggaccatgctctcaagtggcgactggaggaggcccaggactga
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integrated database retrieval system
