Mastomys coucha (southern multimammate mouse): 116103507
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Entry
116103507 CDS
T07224
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116103507 (Taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116103507 (Taf6l)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116103507 (Taf6l)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116103507 (Taf6l)
Coactivators
SAGA/TFTC/STAGA complex
116103507 (Taf6l)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116103507 (Taf6l)
STAGA complex
116103507 (Taf6l)
TFTC complex
116103507 (Taf6l)
SAGA complex
116103507 (Taf6l)
SLIK complex
116103507 (Taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
116103507
NCBI-ProteinID:
XP_031245432
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MQSSTGAMSEREERRFVEIPRESVRLMAESTGIELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNRGGLGGRGYGPAEDLPWDSLLLQESPPGASSET
GFGSGLPLPSGVAGPEDPSSLTLADIYRELYSFFGDSLATRFGTGQPAPTAPRPPGDKKE
PAAAPDSVRKMPQLTASAVVSPQGDESPCGGTLAAANAASENRPLPRVHRARGAPRQQGP
GAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLP
MIGRTGRPARRWALSDYSLYLPL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctccaccggggccatgtcagaaagagaagagaggaggtttgtggagatccct
cgggagtcagtccgactcatggcagagagcacagggatagagctgagtgacgaggtggct
gctctgcttgctgaagatgtgtgctaccgcctcagagaggccacacagaatagctctcag
ttcatgaaacacaccaaacgaaggaagctgacggtggaggacttcaacagggctctcagg
tggagcagtgtggaggctgtgtgtggctatgggtcccaggaagcattgcccttgcgccct
gcaagggagggtgaactctactttccagaggatcgagaagtgaacctggtggagctggca
ctagccaccaacatccccaagggctgtgcagagacagctgtcagagttcatgtctcctac
ctggatggcaaaggaaacctggcccctcagggatcagtgcccagtgcagtgtcttcactg
acagatgacctgctcaaatactaccagcaagtgacacgggctgtactgggcgatgaccca
cagctgatgaaggttgccctccaggacctgcagacaaactccaagattgcagcgctcctg
ccttactttgtgtatgtggtcagtggggtaaaatctgtaagccatgacctggagcaactg
caccgactgctgcaggtggcacggagcctgatccggaacccacacctgtgcttggggccc
tatgtccgatccctggtgggcagcgtgctttactgtgtcttggagccactggctgcctcc
atcaaccctttgaatgaccactggactctgcgagatggggctgcccttctactcagccac
atcttctggactcatggagaccttgtaagtggcctctaccagcagattctgctctccctg
cagaaggtcctgacagaccctgttcggcctctctgttctcactatggagcagtggtaggg
ctgcatgctctaggctggaaggcagtggaacgagtcctctacccgcatctgcctacttac
tggacaaacttgcaggctgtgctggatgactattctgtatctaatgcccaggtcaaagca
gatgggcacaaagtgtatggagctattctggtggccgtagagcgactactgaagatgaaa
gctcaggcagcagagcccaaccgcggtggccttggcgggagagggtacggtcctgcggag
gacctgccttgggacagccttctcctacaggagtctccccccggggccagttctgagacg
ggttttgggtctggtctcccgctgccgtcaggggttgcgggaccagaggacccttcttcc
ttgaccctggcagacatctaccgtgagctatactccttctttggtgacagcctggccact
cgcttcggcactggccagcctgctcccacggccccacgaccaccgggagacaagaaggag
cctgcggctgccccggattcggtgcggaaaatgccgcagctgactgccagcgccgtggtc
agccctcagggtgacgaaagcccgtgcggggggaccctcgccgccgccaacgccgcctcg
gagaacaggccactgccgcgcgtacaccgggcgcggggcgctccccgtcagcagggtccc
ggcgcggggacgcgagacgtcttccagaagagccgcttcgcgccccgcggcgccccacac
ttccggtttataatcgcagggcgccaggcggggcggcgctgccgcgggcgcctctttcaa
actgctttccctgcaccctatgggcccagccccgcgtcgcgctacgtgcagaagctgccg
atgatcggccgtaccggccgcccggcccgccgctgggcgctctccgactactcgctgtac
ctgccgctgtga
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