Mastomys coucha (southern multimammate mouse): 116103554
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Entry
116103554 CDS
T07224
Symbol
Slamf1
Name
(RefSeq) signaling lymphocytic activation molecule isoform X1
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
mcoc04517
IgSF CAM signaling
mcoc05162
Measles
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116103554 (Slamf1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116103554 (Slamf1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
116103554 (Slamf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116103554 (Slamf1)
04090 CD molecules [BR:
mcoc04090
]
116103554 (Slamf1)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
SLAM/CD2 family
116103554 (Slamf1)
CD molecules [BR:
mcoc04090
]
Proteins
116103554 (Slamf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_2
DUF3377
Psg1
TMEM154
ABC2_membrane_3
DUF5737
Motif
Other DBs
NCBI-GeneID:
116103554
NCBI-ProteinID:
XP_031245546
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MDPSGSRSLRILLLLSLAFELSYGTGGGVMDCPVIHQKLGQDTWLSLTNEHQINKSVNKS
IRILVTMATSPGSKTNKKIVSFDLSKGGYPDHLEDGYHFQSENLSLKVLGNRRESEGWYF
VSVEENVSVQQFCMQLKLYEQVSTPEMKVLNKTQEDENGTCSLLLACTVKKGDHVAYRWS
NEAGTHVLSPANSSHLLQVTLSNQHQDSIFNCTASNPVSSRSRPFDLQKECWQESSPEPN
SWIPYIVVPLVVIIIIFLVSIAMIMMKRQGKPNHFQPPVEEKSLTIYAQVQKSGPQEKKL
HDALADQDPCTTIYVAATEPAPESVQEPNPTTVYASVTLPES
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagcggatcccgttccttgagaatacttctgctcctctccctggcttttgag
ttgagctatggaacaggtggaggtgtgatggattgcccagtgattcaccagaagctggga
caggacacgtggctgtccctgacaaatgaacaccagataaacaagagcgtgaacaaaagc
atccgcatccttgtcacgatggccacatctccaggaagcaaaaccaacaagaagatagtg
tcttttgatctctcgaaagggggctatccagatcacctggaggatggctaccactttcaa
tcagaaaacctgagcctgaaggtcctggggaacaggagggagagtgaaggatggtacttt
gtgagcgtggaggagaacgtgtctgttcaacaattctgcatgcagctgaagctttacgag
caggtctccactccagagatgaaagtgctaaacaaaacccaggaggacgagaatgggacc
tgcagcttgctgttagcttgcacggtgaagaaaggggaccacgtggcttaccgctggagc
aatgaggcaggcacccacgtgctgagcccagccaacagctcccacctcctgcaagtcacg
cttagcaaccagcatcaagacagcatcttcaactgcacagcaagcaatcctgtcagcagt
cgctctaggcccttcgacctacagaaagaatgctggcaagaatcctccccagaaccgaat
tcatggataccatacattgttgtaccattagtggtcattataatcatcttcctggtttcc
atagcaatgataatgatgaaaagacaaggtaaaccaaatcacttccagccaccagtggaa
gaaaaaagccttactatttatgcccaagtacagaaatcagggcctcaagagaagaaactt
catgatgccctggcagatcaggacccctgcacgaccatttatgtggctgcaacagagcct
gccccagagtctgtccaggaaccaaaccctaccacagtttatgccagtgtgacactacca
gagagctga
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