Mastomys coucha (southern multimammate mouse): 116103641
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Entry
116103641 CDS
T07224
Symbol
Ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04330
Notch signaling pathway
mcoc05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116103641 (Ncstn)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116103641 (Ncstn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
116103641
NCBI-ProteinID:
XP_031245749
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MATTRGGSGPDPGSRDLLLLLSFSVVLAGLCRGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKEEDLKWVLTDGPNPPYMVLLEGKLFTRSIMEKLKGSTSRISG
LAVTLAKPNSTSGFSPSVQCPNDGFGIYSSSYGPEFAHCKKTLWNELGNGLAYEDFSFPI
FLLEDENETKVIKQCYQDHNLGQNGSAPSFPLCAMQLFSHMHAVISTATCMRRSFIQSTF
SINPEIVCDPLSDYNVWSMLKPINTSGGLEADVRVVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALHKAPDATTLPRNVMFVFFQGETFDYIGSSRMVYDMENGKFPVRLENID
SFVELGQVALRTSLDLWMHTDPMSQKNESVKNQVEDLLATLEKSGAGVPEVVLRRPLQSQ
ALPPSSLQRFLRARNISGVVLADHSGSFHNRYYQSIYDTAENINVTYPEWQSPDEDLNFV
TDTAKALANVATVVARALYELAGGTNFSSSIQADPQTVTRLLYGFLIRANNSWFQSIFKH
DLRSYLDDGPLQHYIAVSSPTNTTYVVQYALANLTGKATNLTREQCQDPSKVPNESKDLY
EYSWVQGPWNSNKTERLPRCVRSTVRLARALSPAFELSQWSSTEYSTWAESRWKDIQARI
FLIASKELEFITLIVGFSILVVSLIVTYCINAKADVLFVAPREPGAVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctacgactaggggcggctctgggcctgacccaggaagtcgggatcttcttcttctt
ctgtctttttccgtggtactggcaggactgtgtaggggaaactcagtggagaggaagatc
tacattcccttaaataaaacagctccttgtgtccgcctgctcaacgccactcatcagatt
ggctgccagtcttcaattagtggggacacaggggttatccacgtagtggagaaagaagaa
gacctgaagtgggtgttgaccgatggccccaaccccccttacatggttctgctggagggc
aagctctttaccagaagcataatggagaagctgaaggggagcaccagtaggatttcgggt
cttgccgtgactctagccaagcccaattcaacctcaggcttctctcctagtgtgcagtgc
ccaaatgatgggtttggtatttactccagctcctatgggccagaatttgctcactgcaaa
aaaacattgtggaatgaactgggcaatggcttggcttatgaggactttagtttccccatc
tttcttcttgaagatgagaacgaaaccaaggtcatcaagcagtgctatcaagatcacaac
ctgggtcagaatggctctgcaccaagcttcccattatgtgctatgcagctcttctcacac
atgcacgccgtcatcagcactgccacctgcatgcggcgtagcttcatccagagcaccttc
agcatcaacccagaaatcgtctgtgaccccttatccgactacaatgtatggagcatgctt
aaacctataaatacatctgggggattagaagctgatgtcagggttgtggttgcggccaca
cggctggatagccggtcctttttctggaatgtggccccaggggcagaaagtgctgtagcc
tcctttgtcactcagctggctgcagctgaagctttgcacaaggcacctgatgcgaccacc
ctaccccgaaatgtgatgtttgtcttcttccagggggaaacttttgactacattggcagc
tcacggatggtctatgatatggagaacggcaagtttcctgtgcggctagagaacattgac
tcgttcgtggagctgggacaggtggccctaagaacttcactagatctctggatgcacaca
gatcccatgtctcagaaaaatgaatctgtgaaaaaccaggtggaggatcttctggccact
ctggagaagagtggcgctggtgtccccgaagtcgtcctgaggagaccgctccagtcccag
gcccttccaccttcatctctacaacgatttcttcgggctcgaaacatctccggtgtggtc
ctggctgaccactctggctccttccacaatcggtattaccagagcatttacgacacagct
gagaacattaatgtgacctatcctgagtggcagagcccagatgaggaccttaactttgtg
acagacactgccaaggcactggcgaatgtggccacagtggtggcacgtgcactgtatgag
cttgcgggaggaaccaacttcagcagctccattcaggcggatccccagacagttactcgt
ctgctctacggcttcctgattagagctaacaactcatggtttcagtctatcttcaaacat
gatctaaggtcctatttggatgacgggcctcttcaacactacatcgctgtctccagccct
accaacacgacgtacgttgtgcagtatgccttggcaaacctgaccggcaaggcgactaac
ctcaccagagagcagtgccaggatccaagtaaagtcccaaatgaaagcaaggatttatat
gaatactcgtgggtacaaggcccttggaattccaacaagacagagcggctccctcggtgt
gtgcgctccacagtacgactggctagggccttgtcccccgccttcgaactgagtcagtgg
agctccacggagtattctacgtgggccgagagccgctggaaagacatccaagcgcggatt
ttcctcattgccagcaaagaacttgagttcatcacgctgatcgtgggcttcagcatcctg
gtcgtctctctcatcgtcacttactgcatcaacgccaaagctgacgtcctcttcgttgct
ccccgggagccaggagctgtgtcttactga
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