Mastomys coucha (southern multimammate mouse): 116103645
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Entry
116103645 CDS
T07224
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
116103645 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116103645 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcoc03310
]
116103645 (Rorb)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116103645 (Rorb)
Nuclear receptors [BR:
mcoc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116103645 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116103645
NCBI-ProteinID:
XP_031245753
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MCENQLKTKADGTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNGLSSLNTETGGTYANGHVIDLPKSEGYYSIDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCAAVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaaactaaagctgacggcactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctccgggatccactacggagtcatcacatgtgaaggc
tgcaagggattcttcaggaggagccagcagaacaatgcctcttactcctgcccaaggcag
agaaactgtttaattgacagaaccaacaggaaccgttgccaacactgccgcctgcagaag
tgtcttgccctaggaatgtcaagagatgctgttaagttcgggaggatgtccaagaagcag
cgggacagcctgtatgctgaggtgcagaagcatcagcagaggcttcaggagcagcggcag
caacagagtggggaggcggaggctcttgccagggtgtacagcagcagcattagcaatggc
ctcagcagcctgaacaccgagaccggcggcacatatgccaacgggcacgtcattgacctg
cccaagtccgaaggttattacagcatagattccggtcagccgtctcccgatcagtcagga
ctggacatgactggaatcaaacagataaagcaagaacctatctatgacctcacatccgta
cccaacttgtttacctatagctctttcaacaacgggcagttagctcccgggataacaatg
tctgagatcgatcgaattgcacagaatatcattaagtcccatttggagacatgtcagtac
acaatggaagagctacatcagctggcgtggcagacccacacctatgaggaaataaaggcg
tatcaaagcaagtccagggaggctctgtggcagcagtgtgccatccagatcacccacgcc
atccagtacgtggtggagtttgccaagcggataacaggcttcatggagctgtgtcagaac
gatcagattctacttctgaagtcaggttgcttggaagtggttttagtgagaatgtgtcgt
gccttcaacccattaaacaacactgttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttctgatgacctagtgaatgaagcatttgactttgcgaagaatctg
tgttccttgcagctgactgaggaggagattgctctgttctcctctgctgttctgatatcc
ccagaccgagcctggctgatagaaccaagaaaagtccagaagcttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaatcacctggatgatgagaccctggcaaagtta
atagccaagataccaactatcacagcagtctgcaacttgcatggggagaagctgcaggta
tttaagcagtctcatccagacatagtgaatacactgtttcctccattgtacaaggagctc
tttaatcctgactgtgctgcggtctgcaaatga
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