Mastomys coucha (southern multimammate mouse): 116103786
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Entry
116103786 CDS
T07224
Symbol
Btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116103786 (Btaf1)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116103786 (Btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_GCN1
HEAT_MROH2B_C
TOR1L1_N
HEAT_2
HEAT_GCN1_C
TPR_Trm732_C
HEAT_GCN1_C_2
HEAT_GCN1_2
ARM_ECM29
UTP20
Rac1
Spe-44
Motif
Other DBs
NCBI-GeneID:
116103786
NCBI-ProteinID:
XP_031246035
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRI
AAGQAVEAIVKNVPEWNPIPRTKQEPTESSMEDSSTTDRLNFDRFDICRLLQHGASLLGS
AGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSA
ALVNKQSTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGE
PEEKRRKVANVVINQTSSDSKVLIDNVPESSSLIEETNEWPLESFCEELCNDLFNPSWEV
RHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSD
EVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQ
DVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPSIINTLWDSLL
ELDDLTASTNSIMTLLSSMLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETL
FTLLSTQDQNSSSWLIPILSDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVVA
AACPWMGAWLCLMMQPSHLPIDLNMLLEVKARAKEKTGGKVRQGQIQNKEVLQEYIAGAD
TIMEDPATRDFVVMRARMMAAKLLGALCCCICDPGVNMVNQEIKPAESLGQLLLFHLNSK
SALQRISVALVICEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQF
ISSLADAHIEVGNRVNNSVLTIDQANDLVTTVFNEVTSTFDLNPQVLQQLDSKRHQVQMT
VAETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQYI
AKLLQQCTTRMPCPNSKVIKNLCSSLCVDPYLTPCVTCPVPAQSGQENSKGSNSEKDGMH
HTVTKHRGIITLYRHQKAAFAITSRRGPIPKAIKAQIADLPAGSSGTILVELDEGQKPYL
VQRRGAEFALTTIVKHFGAEMAVKLPHLWDAMVGPLKTMIDLSNFDGKSLLERGDVPAQE
LVNSLQVFEIAAASMDSALHPLLVQHLPHLYMCLQYPSTAVRHMAARCIGVMSKIATLET
MNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDS
VRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPVP
INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYAKSKL
AECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVA
SYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVL
ELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLL
RRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSVALSEETEKPK
LKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQ
LLLDCGLGNGSSSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI
PPGQRHSIVARFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAH
RIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLD
KDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNLETFMRSLE
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccaggcttgaccgtctttttatcttactggatactggtactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtggtgaagcttcatcctcatgaatta
aataatttgttatcaaaggtattaatatacttaaggagtgcaaattgggatacccggatt
gcagcaggacaagctgttgaagctatagtgaaaaacgtgcctgagtggaatccaatacca
agaactaaacaagaacccacagagagttctatggaagattcatctactacagatcgatta
aattttgacagatttgatatatgcagattgttacagcatggggcatcacttttggggtct
gctggtgcagaatttgaagtccaagatgaaaaatcaggtgaagtggatcctaaagagagg
atagcacgtcagcggaaattattacagaagaaacttggtcttaatatgggagaagcaatt
ggaatgagtactgaagaactcttcaatgatgaagatttggattataccccaacttcagca
gcccttgtaaacaaacaatctactctccaagcagctgaattgattgattcagaattccga
gcaggaatgagtaatagacagaagaacaaagctaaaagaatggccaagttatttgcaaaa
cagagatccagggatgcagtggaaacgaatgagaagagcaatgacagcactgatggagag
ccagaagaaaagagacggaaagtagcaaacgttgttattaatcagacttcaagtgattcc
aaagtcttgatagataatgttccagaaagttcttccttaattgaagagacaaatgaatgg
cctttggaaagcttttgtgaagaactttgcaatgacctttttaacccctcatgggaggtt
cgacatggggcaggtactggactcagagaaattcttaaagctcatgggaaaagtggtggt
aaaatgggagatagcactttagaagagatgattcagcagcatcaagagtggttggaagac
ttagttattagactcctttgtgtttttgcattggacagatttggagacttcgtttctgat
gaagttgtagcgccagttcgtgaaacttgtgctcaaacattaggtgtggttttaaagcac
atgaacgaaacaggagttcataagacagtggatgtgctgctgaaattattgacacaagaa
cagtgggaagttagacatggtggtcttctgggaataaaatatgctttggcagttcgtcag
gatgtaatcaatactttattgcctaaagtattaactcgaataatcgagggactccaggac
cttgatgacgatgttagagccgttgctgcagcatccttagttcctgtagtagaaagcctt
gtctaccttcagacgcaaaaggttccctctattataaataccttatgggattctctactg
gaattagatgatcttacagcttcaacaaatagtattatgactctcctttcatccatgtta
acttaccctcaggtccagcaatgcagtattcagcagtcactgacagttttagtcccacgt
gtctggccatttttgcatcacactatatcttcagttcgaagagcagcattggaaactctc
tttacattattatcaacacaggaccagaactcatcatcttggctcatacctatcctgtcg
gatatgctgcgacacatttttcagttttgtgttttagaaagcagccaggaaattctggat
cttattcacaaggtctggatggaactgttgagcaaggcttcagttcagtatgtggtggca
gctgcttgtccgtggatgggtgcttggctttgcttaatgatgcagccttctcatttacct
attgatttaaatatgctgctagaagtaaaagctagagccaaggaaaaaacaggtggtaag
gtacggcaaggccaaatccagaataaagaagtgcttcaggagtatattgcaggtgcagac
accatcatggaggacccagccaccagggactttgtagttatgagggccaggatgatggca
gccaagttgttaggagcactctgttgctgtatttgtgatccaggtgtaaacatggtaaac
caagaaatcaaaccagcagaatccctgggccagctactactcttccatttgaattccaaa
tctgctttacagagaattagtgttgcgctagtgatctgtgaatgggctgctttacaaaag
gagtgtaaagctgttaccctagctgtgcagccgcgtttacttgatatcctttcagaacat
ttgtattatgatgaaattgctgttccgttcacacgtatgcagaatgaatgtaaacagttt
atatcatcattagctgatgcacatattgaagttggtaatagagtaaacaacagtgtttta
acaatagatcaagctaacgacctggtaactactgtttttaatgaagtcacatcaactttt
gatttaaatcctcaagtgttacagcagttagatagtaaacggcatcaggtccaaatgaca
gttgcagagacgaaccaggagtggcaagtgttacagctaagagtacatacgtttgctgca
tgtgcagttgtgagcttgcagcagcttccggagaaactaaatcctatcataaaaccacta
atggaaacaattaaaaaagaagagaatacactagtacagaactatgctgctcagtacata
gctaagcttcttcagcagtgtacaacacggatgccatgtcctaattcaaaagttattaag
aacctctgtagctctctttgtgtggacccatacctcactccctgtgtaacatgcccggta
ccagcacaaagtggccaggaaaattctaaaggatccaactcagaaaaagatggaatgcac
catactgtcaccaagcacagaggtatcattacactctataggcaccagaaagcagctttt
gctatcacaagcaggcgaggccctatccccaaagcaatcaaagctcagatagcagatcta
cctgcaggaagtagtgggactatcctggttgaactcgatgagggtcagaaaccttacctg
gtacaacggagaggagctgagtttgccttaacaactatagtgaagcattttggtgctgaa
atggcagtgaagttgccacatctttgggatgccatggttggcccattgaagactatgatt
gacctaagtaattttgatggaaagtctctcctggaaagaggtgatgttcctgctcaagaa
ttggtgaattcccttcaagtgtttgaaatagcagcagcttcaatggattctgcacttcat
cccttgctggtacagcatttgcctcatctttatatgtgccttcagtatcctagcactgca
gtgaggcatatggcggctcgttgcataggtgtcatgagtaaaatagctaccctggaaaca
atgaatatttttttggagaaggtacttccttggttgggagcaattgatgacaatgtcaag
caagaaggtgcaattgaagcacttgcctgtgttatggaacaattggatgtcggtattgtt
ccatatattgtccttttagttgtgcctgtattgggaagaatgagtgatcagacagacagt
gtgagattcatggccacccagtgctttgcaacactgattagattgatgccacttgaggct
ggcattccagaccctccaaatatgtcagaagaattaatccaattgaaagcaaaagagcga
cactttttagagcaattgttagatgggaagaagttagaaaattacaagatcccagtgcca
atcaatgctgaactcagaaagtatcagcaggacggtgtgaactggttagcctttctcaat
aagtataagcttcatgggattctgtgtgatgacatgggcttagggaaaacattacagtcc
atctgcatcctagcaggagatcattgtcagagggcccaggaatatgcaaaatcgaaattg
gcagaatgtatgccacttccttccttggtggtttgtccaccaacattaacgggtcattgg
gtagatgaagtaggtaaattttgctccagagaatatctcaatccgttgcattatactggc
cctcccactgaaaggataaggttgcaacatcaagtaaaaaggcataatctgatagtagcc
tcatatgatgttgtgaggaatgatatagacttttttagaaatattaaatttaactactgt
attcttgatgaaggccatgtcataaaaaatggaaaaaccaagttgtcaaaagcagtaaaa
cagctgactgctaactataggattattctttctggaacaccaatccagaacaatgttttg
gagttgtggtcattatttgatttccttatgcctggatttttgggtactgaacgccagttt
gctgctcggtatggcaaacctatattagcgagtagggatgcacggagctccagtagagaa
caagaagcaggtgttcttgcaatggatgcactgcaccggcaagtcctgccgtttcttctc
agaagaatgaaagaagatgttttgcaagatcttccacctaaaattattcaagactattac
tgtactcttagccctctccaggttcagctttatgaagattttgctaagtcacgtgccaag
tgtgatgtcgatgagactgtgtcttcagttgcactttcagaagaaactgaaaaaccaaaa
cttaaagctacaggccatgtatttcaggcattacaatatttacgtaagctctgcaaccat
ccagcattggtcttaacccctcagcatccagaattcaagagcactactgaaaaactggca
gttcagaattcttctcttcatgatattcaacatgcccctaagctctcagccttgaaacaa
ttgctgttggactgtggtttgggaaatggcagttcttcagagagtggcacagagtctgtt
gtggcacagcacagaatactgatcttctgtcagcttaaaagcatgcttgatatagtagaa
catgatctgctcaagcctcacctgccctctgtcacttatttgagactagatggcagcata
cctcctggacagcggcactccattgttgcccggtttaacaatgacccgtccattgatgtt
cttctactcacaactcacgttggtggcctagggcttaacttgacaggtgctgacactgtg
gtgtttgtggagcatgactggaaccctatgcgagatttacaggccatggaccgggcccac
cgtattgggcagaaacgtgtggttaatgtctaccggttgataaccagaggaacactggaa
gaaaagataatgggcttgcagaaattcaagatgaacattgcaaataccgttatcagccag
gaaaattccagcttgcagagtatgggcactgatcagcttcttgacctgtttactctcgat
aaggatggaaaagcagaaaaggctgacagctccacttctggcaaagcaagcatgaaatca
gttcttgaaaacctgagtgacctctgggatgccgagcagtatgattccgagtacaacctg
gagacctttatgcgttctctcgagtga
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integrated database retrieval system
