Mastomys coucha (southern multimammate mouse): 116103838
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Entry
116103838 CDS
T07224
Symbol
Mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116103838 (Mms19)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116103838 (Mms19)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116103838 (Mms19)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
116103838 (Mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
116103838
NCBI-ProteinID:
XP_031246187
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MAAATALEEAAAPMGALCGLVQDFVMGQQEGPADQVAADVKSGDYTVLQVVEALGSSLEN
PEPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLS
VALPPGLAVSVLKAIFQEVHVQSLLQVDRHTVFSIITNFMRSREEELKGLGADFTFGFIQ
VMDGEKDPRNLLLAFRIVHDLISKDYSLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRE
DLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLP
SLWASIRREVFQTASERVEAEGLAALHSLTACLSCSVLRADAEDLLDPFLSNILQDCRHH
LCEPDMKLVWPSAKLLQAAAGASARACEHIISHVLPLLLEQFHKHSQSNQRRTILEMILG
FLKLQQKWSYEDRDERPLSSFKNQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQPDLLSA
EDLELAVGHLYRLSFLEEESQSCRVAALEASGTLATLYPGAFSSHLLPKLAEELHKGESD
VARVDGPTKCSRHFCCLQALSAVSTHPSIVKETLPLLLQHLCQANKGNMVTESSEVVAVC
QSLQQVAGKCQQEPESYWYFHKTAVPCLFALAVQASMPEKESSGLRNVLLEDEVLAALAS
VIGTATTHLSPELAAQSVTCIVPLFLDGNTSFLPENSFPGQFQPFQDGSPGQRRLVALLT
AFVCSLPRNVEIPQLNRLMRELLEQSCGHSCPFSSTAATKCFAGLLNKQPPGQQLDEFLQ
LAVGTVEAGLASESSRNQAFTLLLWVTKALVLRYHPLSACLTTRLMGLLSDPELGCAAAD
GFSLLMSDCTDVLTRTGHADVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVL
NRLPKPVLLPELPTLLSLLLEALSCSDSVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKF
LNLSSSYSMAVRIAALQCMHALTRLPTSVLLPYKSKVIRALAKPLDDKKRLVRKEAVLAR
GEWFLLGSPGS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccaccgctctggaggaggcagcggcgcctatgggcgccctgtgtggcctc
gtgcaagacttcgtcatgggtcagcaggaggggccggctgaccaggtggctgcagatgtg
aagtccggtgattatacagtgttacaagtagtagaagcccttgggtcttctctagagaat
ccagaaccccgaactcgggctcgaggaatccagcttttgtcacaggtgctactccagtgt
cactccttgcttttggagaaggaagtggtccacctgatcctgttctatgagaatcggctg
aaggaccatcatcttgtgatcccatctgtcctacagggcctgagggcactgagcctgtct
gtggccctgcccccaggactggctgtctctgtgcttaaagccatcttccaggaggtacat
gtacagtccctgctacaggtggaccgccatactgtcttcagtatcatcactaacttcatg
cgatcacgagaagaagagctgaagggcctcggagctgactttacatttggcttcatccag
gtgatggatggagagaaggatccccggaatcttttgctggctttccgcatcgtccatgac
ctcatctccaaggactacagtctgggaccttttgtggaagagttatttgaagtgacatct
tgttatttccctattgattttacccctccacctaatgatccttacggcatccagagagag
gatctcatcctgagcctccgtgctgtgctggcatctacaccgcgctttgctgagttctta
ctgcctctgctaattgagaaagtggattctgagattttaagtgccaagctggattctctg
caaactctgaatgcttgctgtgctgtgtatggacagaaggaactaaaggacttccttccc
agtctgtgggcttccatccgcagagaggttttccagacggcaagtgagcgagtagaggca
gagggcctggcagctctccattccctgactgcatgtttgtcttgctctgtgctgagagct
gatgctgaggacctcctcgaccccttcctcagcaacattctacaagactgcaggcaccac
ctgtgtgaaccagacatgaaacttgtatggcctagcgctaagctgctgcaggcagctgca
ggtgcatctgcccgggcctgtgagcacatcatcagccacgtgcttcccttgctgctggaa
cagttccacaagcacagtcagagcaaccagcggcgaacaatccttgaaatgatcctggga
ttcttaaagctacagcagaaatggagctatgaagacagagatgaaaggcctctgagtagc
ttcaaaaaccagctttgctcattggtgttcatggctctaacagaccccagcacccagctt
cagcttgttggcatccggacgctcacagtcttgggtgcccagccagatctcctgtctgct
gaggacttggagttggcagtaggtcacctgtaccgactgagcttcctggaggaagagtcc
cagagttgtagggtggcagcactggaggcatcaggaactctggccactctgtatcctgga
gccttcagcagccacctgctacccaagcttgctgaggagctgcataaaggggagtcagat
gtggctagagtggatggtcccaccaaatgttcccggcatttctgctgtctgcaagctttg
tcagctgtttcaacacatcccagcattgtcaaggagacactgcctctgctactgcagcat
ctctgtcaagcaaacaaagggaatatggttacagagtccagtgaagttgttgctgtctgt
cagagtctccagcaggtggcaggaaaatgccagcaggaacctgagagctactggtatttc
cacaagacagctgtaccctgcctgtttgcactggctgtgcaggcttcaatgccagagaag
gaatcctcaggtctgagaaatgtactgttggaggatgaggtcttggctgcgttggcatct
gtcattggcacggccactactcatctgagccccgaactagctgcacagagcgtcacatgc
atcgtgcccctcttcttagatggcaacacctcctttctacctgaaaacagcttcccaggc
caattccagcctttccaggatgggtcccctgggcagaggcggctggttgctctacttacg
gctttcgtctgctccctgccacgaaacgtggaaatccctcagctgaaccgactcatgcgg
gagcttttggagcagagctgtggccacagctgtcccttttcctccactgccgccaccaag
tgctttgcagggctcctcaacaagcagcctccagggcagcagttggatgagtttctccag
ctcgctgtgggcacagtggaggcaggcctggcctctgaatcttcccgtaaccaggctttc
acactgttactctgggtaaccaaggctctagtcctcaggtaccatcccctcagtgcctgc
ctgaccacccgactcatgggcctcctcagtgatccagagctaggctgtgcagcagctgat
ggcttctctctgctcatgtctgactgcactgatgtgttgactcgtactggccatgctgac
gttcggatcatgttccgacagcggttcttcaccgacaatgtgcctgctttggtccaaggt
ttccatgccgctccccaagatgtgaagccaaactatctgaagggtctgtctcatgtactc
aacaggctgcccaagcctgtgcttttaccagagctgcccacccttctttccttgctgctg
gaggcactgtcctgctctgactctgtggtccagctttccactctgagctgtctccagccc
ctactactggaagcaccccaaatcatgagtcttcatgttgatactctggttacgaaattc
ctgaacctcagctccagttattcaatggctgtccggattgctgctctgcagtgtatgcac
gctctcactcgcctacccacttctgtgctactgccatacaaatctaaggtgatccgagcc
ttagccaagcctctggatgacaagaagagacttgtgcgcaaggaagcagtattagcgagg
ggagaatggttcctactggggagccctgggagctga
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integrated database retrieval system
