Mastomys coucha (southern multimammate mouse): 116103846
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Entry
116103846 CDS
T07224
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116103846 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116103846 (Exosc1)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116103846 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
116103846 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
116103846
NCBI-ProteinID:
XP_031246201
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MVASMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVVSVM
RETESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKV
EIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPK
THTKEFRKVARVQPEFLQT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaagcatggcaccaccggtgaggtactgcatccccggcgaacgtctgtgtaac
ttggaggaaggcagccccggcagcggcacctacacccggcacggctacatcttttcgtcg
ctggctggctgcctgacgaagagcagcgagaatggcgcgcttcccgtggtgtcagtaatg
agagagacagaatcccagttacttccagatgtgggagctgtcgtcacctgtaaggtctct
agcatcaactcacgttttgccaaagtacacatcctgtatgtgggatccacaccacttaaa
aatgctttccgaggaactatccgcaaggaagatatccgggcaactgaaaaagacaaggtt
gaaatttacaagagcttccggccaggtgacatagttttggccaaagttatctccctaggt
gatgcacagtccaattacctactgactactgctgaaaatgaattaggagttgtggtagcc
cacagtgagtcaggtgtccagatggttcccatcagctggtgtgagatgcagtgccccaag
acccacacgaaagaattccgaaaagtagcccgagtgcagcccgagttcttacaaacctaa
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