Mastomys coucha (southern multimammate mouse): 116103922
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Entry
116103922 CDS
T07224
Symbol
Poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03410
Base excision repair
mcoc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116103922 (Poll)
03450 Non-homologous end-joining
116103922 (Poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116103922 (Poll)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116103922 (Poll)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116103922 (Poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
116103922 (Poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
BRCT_2
HHH
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
116103922
NCBI-ProteinID:
XP_031246350
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MDPQGILKAFPKRKKIHADPSSKAPAKIPKREAGEARGWLSSLRAHIMSTGIGRARAELF
EKQIIQHGGQVCSAQAPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQE
GRLTDTAGFSVSIPKRSLDEPQLSKSGQDASVPDTQRGLPRTAPSLSPSHTRAVSPPPKA
EKPPRAQDQLSSEDEASDEEGPQVSSADLQALISGHYPTHPGEDDGPDPAPEALDKWVCA
QPSSQKATNYNLHITEKLEVLAKAYQVQGDKWRALGYAKAINALKSFHKPVSSYQEACSI
PGIGKRMAEKVMEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRSLED
IRSLGSLTAQQVIGLKHYEDFLDRMPREEAAEIEQTVRISAQALNPGLLCVACGSYRRGK
MTCGDVDVLITHPDGRSHQGIFSHLLDNLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGP
GQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVIRNSHG
VKVGPGQVLSTPTEKDVFKLLGLPYREPAERDW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagggtatcttgaaggcatttcccaagcgaaagaaaattcacgcagatcca
tcatcaaaagcacctgcgaagattcccaaacgggaggcgggagaagctagaggatggctg
agttccctgagggcccacattatgtccactggcattggacgagcccgggctgaactcttt
gagaagcagattatccagcatggtggccaggtgtgctctgcccaggccccaggggtcact
cacattgtggtggacgaaggcatggactatgagcgggctctccggctcctcaggctgccc
cagctacctcctggtgctcagctggtgaagtcggcctggctgagcttgtgcctgcaggag
ggaaggcttacagacacggctggattcagcgtctccatccccaagaggtccttggacgaa
ccacagctcagcaagtcaggccaagatgcctctgttcccgacacccagaggggtttgccc
aggacagctccatctctttccccttctcacaccagagctgtatctcctcccccaaaagca
gaaaagccaccaagagcccaagaccagctcagctcagaggatgaagccagcgatgaggaa
gggccccaggttagctcagcagatctgcaagccttgatcagtgggcactaccccacccac
cctggggaagatgatgggcctgacccagccccggaagctctggataagtgggtctgtgca
cagccctcgagccagaaggcaaccaactacaacctgcacatcacagagaagctggaagtg
ctggctaaagcctaccaagtccagggggacaagtggagagccctgggctatgctaaggcc
atcaatgccctcaagagcttccacaaacctgtcagctcctaccaggaggcctgcagcatc
ccagggattggcaagaggatggcggagaaagtcatggagatcctggagagtgggcatctg
cggaagctagaccacatcagtgacagtgtgcctgtcttggagctcttttccaacatctgg
ggagctgggacgaagactgcccagatgtggtaccatcagggcttccgaagcctagaagat
atccgaagcctgggctccctgaccgctcagcaggtcattggcttgaagcactatgaggac
ttcctggaccgcatgcccagggaggaggctgcagaaattgagcagacggtccggatatca
gcccaggccctcaaccctgggctgctgtgtgtagcctgtggctcttatcgacgggggaag
atgacctgcggagatgtggacgtactcattactcaccctgatggccggtcccaccagggc
atcttcagccatctccttgacaaccttcggcagcaagggttcctcacagatgacttggtg
agccaggaggagaatggccagcagcagaaatacctgggtgtgtgccggctcccagggcct
gggcagcgccaccggcgactggacatcatcgtggtgccctacagtgagtttgcttgtgcc
ctactctacttcaccggctctgcccacttcaaccggtccatgagagctttggccaagacc
aagggtatgagcctgtcagagcatgctcttagtgcagccgtgatccggaacagccacggt
gtcaaggtggggcctggacaagtgctgtccacccccacagagaaggatgtcttcaagctc
ttaggcctgccctaccgagagccggctgaacgggactggtga
DBGET
integrated database retrieval system
