Mastomys coucha (southern multimammate mouse): 116103962
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Entry
116103962 CDS
T07224
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116103962 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116103962 (Taf5)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116103962 (Taf5)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116103962 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
116103962 (Taf5)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116103962 (Taf5)
STAGA complex
116103962 (Taf5)
TFTC complex
116103962 (Taf5)
SAGA complex
116103962 (Taf5)
SLIK complex
116103962 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
116103962
NCBI-ProteinID:
XP_031246465
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPSQAGDGAGEGSGGTPNNGPNGGGGGNVAVAAAAGG
DGGTPKPGVAVSAAAPAGAAPVPAAPAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGSGAAGELDGAGAEAASALLSRVTASVPGSAAPDAPGTGASVTSVFSGSAS
GPAAPGKVPSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHESEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETSKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctaccttcgcaggctggcgacggcgcaggcgaggggagcggtggcactcct
aacaacggccccaacggcggcggcggcgggaatgtggcggtggcggcggcggccggcggg
gacggcgggacccccaagcctggggtggccgtctctgccgctgctccggcgggggcggcc
ccggtgcccgccgctcccgccgaggccggcgctccccacgaccgacagactctcctggct
gtgctgcagttcctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgag
gcccggctgctggaggaggcggtggcgggctctggagctgccggcgagttggacggggcc
ggtgcggaggcggccagcgcgcttctcagccgggtcaccgcttcggttcccggctccgcg
gcccccgacgctccggggacaggcgcttcggtgacctctgtgttctcagggtcggcctcg
ggtcctgcggctccaggaaaggttccaagtgtagctgtggaagaccagccagacgtcagt
gctgtcttgtcggcctacaaccaacaaggagaccctaccatgtatgaagaatactacagt
ggactgaaacacttcattgaatgttctctggactgccatcgagcagagttatcccaactc
ttttatcctctgtttgtacatatgtacttggagctagtttataatcaacatgaaagtgaa
gcaaaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggagcacatgaaagggaatgagaccatgctggac
ttccggacaagtaagtttgttcttcgcatttcccgtgactcgtaccaactcttgaagcgg
catcttcaggagaaacagaacaatcagatatggaacatagtccaggagcacctctacatc
gacatctttgatgggatgcctcgcagtaagcagcagatagatgccatggtgggaagcttg
gcaggagaggcgaaacgagaagcaaacaaatcgaaggtattttttggtttattaaaagag
ccagaaattgaggtgcctttggatgatgaggatgaagagggagaaaatgaagaaggaaaa
cctaaaaagaagaagcctaaaaaggatagtgttggctctaaaagcaaaaaacaagatccc
aatgccccgcctcagaacagaattcctctacctgagttgaaagattcagacaaactggac
aaaataatgaacatgaaagaaacgagcaagcgagttcgacttgggccagactgcctaccg
tccatttgcttctatacattccttaatgcttaccagggcctcactgcagtggacgtcact
gatgattctagtctgattgctggaggctttgctgattcaactgtcagagtgtggtctgtg
acccctaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaa
tcagatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttg
tatggtcacagtgggcctgtctatggagccagcttcagtccggataggaactacctgctg
tcttcctcggaggacgggactgtcagactctggagcctccagaccttcacctgcttggtc
gggtataaaggacacaactacccagtatgggacacacagttttctccatatggatattat
ttcgtgtcaggaggccatgaccgagtagctcggctttgggctacagatcactatcagcct
ttaagaatatttgctggccatctcgctgatgtgaattgcactaggtttcatccaaattca
aactatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctcaatggt
aactgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacagatggcagagtacttctttgggatattgga
catggcttgatggttggagaattaaaaggccacactgatacagtgtgttcacttaggttt
agtagagatggtgaaattttggcatcaggttcaatggataatacagtccggttatgggat
gccatcaaagcatttgaagatttagagactgatgactttactacagccactgggcatata
aatctacctgagaattcccaggagttattattgggaacatatatgaccaaatcaacacca
gttgtacacctacattttacaagaagaaacttggttctagctgcaggagcttacagtcca
caataa
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integrated database retrieval system
