Mastomys coucha (southern multimammate mouse): 116103973
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Entry
116103973 CDS
T07224
Symbol
Cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116103973 (Cfap43)
Cilium and associated proteins [BR:
mcoc03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
116103973 (Cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
WD40_Prp19
Beta-prop_EML
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116103973
NCBI-ProteinID:
XP_031246482
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MSQGREREEVPADASATVSATVSATVSATASATASASAHYSGTSLSVRWVQGFPSQNVHF
VNDKTICYPSGNYVIFINLETKKKTVLQCINGIVGVVATNVPGEVVAFSDRRLKPVIYIY
SFPSLTRKNKLKGDILLDYTLLCFSYCGTYLASYSSLPEFELTLWNWEANVILCKKSNPG
MDISQMSFNPMNWHQMCLSSSSTVSVWTIERSNQEHHFRIRLVKLPLEDGTFLNETDVLF
PTSLPKDLIYGPVLPLSAIAGLVGEEAETFRPKDDIYPLLHPTMHCWTPSSDLYVGCEEG
HLLMINTETLKVTVLQKVEEFPVLDGAQLINPLTLAYQKDGLLASGIDGVIYSFIIKDSK
YQVKTFLEFDGPVAHLVFSPSYKMLLIQTDKGSAYIYTFGAESPLDKLLDASDGKVQAVS
FITPDTKHFLTLTSSGEVSVLSVEDCNCTGRIFLRTQATALACSPSSQSAAVGTMNGYVY
FLNTLDEESPQLIHRAFLSQSPVKILTYDQRGIFLLVGTEEGNIFVIDARPSKSFQIFGF
TETSKDILQISTVSVVESDVVEVLVMSPLPDVGRTRLEYFTLPVLLPQVVPENFSDERGR
LKDDFTHKYLYEVEHMLSSAVLAFLGSKIYGFCSQVPYICSYVMPVKEHTGILVLKPSQK
VQSKQYGPGTIHISSHGLWLMTIASCGILCIRDIFSLETFVRCRSHSHQARGIQNMKMSM
DGQHILVNGKDDNTLVYLKWKRLGANIASEIFEHSHQLSLSLSKTIETENEYLASLKDSQ
NVQQGVPEESQMKMSSESSEEELVNSKTIPWIQQKMEEAIKNEVKIFTPRRKEIKRGIKE
LAQIIAMMMEENEKVDVIAKLEEHEFCLDADELERLHDECEDEVLKIRKDVEMHNLAKTY
LTELIKEECWNSMVVKGRALKCFHIPYVVDNFPMKERTEEELLELSKVMEQRKIEIECLK
LRREIVEVQSTASMIKKHHEEDEEEEDEEKVVKTTSLPNYLLGSLSTDFGADTSLLTNQL
QLHSREEKINQIILLKDIIYNIKKTFNCEFDAAYKQKEIEIARVKEKNVRIAEIISDLEL
DETVWQPVFEDSEMPERALVVEDDEVSFKKYIPPWQKDKSEVTLSYGQERLRQARISDAR
QRGLMDMMGGVLEVKKEDILRMVIPQPPFMAKPDALWSEDERKQFKEYEKKVKELNEERD
KYRKSLEAELKKLQNSIQENTQNFDEHLKRLFERRVKAEMVINQEELKINNIVYSLLLDE
ELSSREQFLNNYLLKKQEEKTKTSEAIQKAREDLDVFKEHHDFLVAEDKILDRSFKKEFS
EISGHQVDILYKLFKRRPRVHKQKTQADVTTLVPYGDRPGSVKLNKENFAQLMKSMDELD
NINNMPEGLDPSVWERFCATRRAKVENEYKVKQKAACLLEMTMFLRKRMEDDEAVHQEIE
RVFHELVRLQEEKVRFQVNLTVQILLKQGQIELENFQLILEYSDAILINKNIIEDLNSVI
RTQGQKKVASMMESKDVHKGIYQIEWEHKKMEMEMEDLNQRAWDIQMLFFSRDRQKYLNE
PNYENVIAIQIGIMEQTIGVIDKNHKKNVENCKKLLKKLGRYSNQKDVANFTLSCNLREE
LVAVSERQDICNEIGSKLTCEKIAKERYDNLMKQQKLTHISKQQAEQISILQAEVDRLRM
KTFPALIPM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaggccgggagcgcgaagaagtccctgccgatgcctctgccacagtctctgcc
acagtctctgccacagtctctgccacagcctctgccacagcctctgcctctgcccactac
tccggaacctccctgtcggtgagatgggtgcaaggattccctagtcagaacgttcacttt
gtcaatgacaagaccatctgctacccttcggggaactatgtaatattcattaacctcgag
accaagaagaagacagtgctccagtgcattaatgggattgtgggcgtcgtggcaactaat
gttcctggtgaagtcgtggctttctccgaccgcagacttaaacctgtcatctacatttac
agctttccttcactgacccgaaaaaacaagttaaaaggcgacatcctcctggactacact
ctactttgcttcagttactgtggcacctacctggccagttactcctctctcccagagttt
gagctgaccctctggaactgggaagccaatgtcatcttgtgcaagaaatcaaatcctggc
atggatataagccagatgtccttcaaccccatgaactggcaccaaatgtgtttatcgagt
tcaagtacagtgagcgtgtggaccattgaaagaagtaaccaggagcatcatttcaggatc
aggttggtaaagctacccctagaagacgggacgttcttaaatgaaaccgatgtgcttttc
cccacctctctgccaaaggatctcatttatgggcctgtcttgccactgtcagccattgct
gggctggtaggcgaagaggcagagacattcaggccgaaagatgacatatatcctctgctt
cacccaaccatgcactgctggactccgtcaagtgacctgtacgtcgggtgtgaagagggt
catcttctgatgatcaacacagaaaccctgaaggtgaccgtgctccagaaggtggaggag
tttccagtactggatggagcccagcttatcaacccgctcacgctggcataccaaaaggac
ggcttactggcttctggaattgatggtgtgatatactcgttcatcatcaaagattcaaag
taccaagtgaagacctttcttgagtttgatggaccagtggcacatctggtgttctctcct
agttacaaaatgctcctgattcaaaccgacaaggggtccgcttatatctacacgtttggt
gcagagtcgcctctcgataaactcctcgacgccagtgatgggaaagtccaggccgtgagc
tttatcacgcctgataccaaacacttcctgacgctcacaagttcgggggaagtttccgtt
ttatcagtagaagactgcaattgtacaggcaggattttcctgaggactcaagcaaccgct
ctggcatgctccccttcttcccagtcggctgcggtggggacgatgaatggctatgtatac
ttcctgaacaccctggacgaggagtcccctcagctgatccaccgggcctttctctcccag
tctccggtgaagattctcacttatgaccagcgaggaatctttctgttagtcggtacagaa
gaaggaaacatctttgtcatcgatgctagaccctcaaagtcatttcaaatttttggattc
actgagacgagcaaggacatcctgcagatatccacagtgtctgtcgtggaatcagacgtg
gtcgaagtgctggtgatgtccccacttccagatgtgggaagaaccaggctggaatacttc
accctgcctgtcttgttaccacaggtggttcctgagaacttttctgatgaaagaggaagg
ctgaaagacgacttcacccacaagtatctctatgaggtggaacacatgctgtcctctgcc
gtgctggccttcttgggcagcaaaatctacggcttctgcagccaggtgccctacatctgc
agctatgtaatgcctgtcaaggaacacactggcatccttgtacttaaacctagccagaag
gtgcagagcaagcagtatggacctggaacgatccatatttcctctcacggactatggctt
atgacaatagctagctgtggaattctctgtatccgagacatcttcagtctggaaaccttt
gttcgatgccggagtcattctcaccaggcacgagggatccagaacatgaaaatgtcaatg
gacggacagcacatcctggtgaatggaaaagatgacaacacccttgtctacctcaaatgg
aagcggcttggagcaaacatagcaagtgaaatctttgaacacagccatcagctatcactc
agtctgtccaagacaatagaaacggagaatgaatacttagcttcactgaaagattcccag
aatgtacagcaaggagtcccagaagaatcccaaatgaagatgagctcagagtcatcagaa
gaggaattagtcaatagcaagactattccctggatccaacaaaaaatggaagaggccatc
aaaaatgaggtgaagatttttacccccagaagaaaggagatcaaaagaggaattaaggag
cttgctcagattattgcaatgatgatggaagaaaatgaaaaggtggatgtcattgcaaaa
ctagaggaacacgaattttgcctagatgccgatgagctggaaaggcttcatgatgaatgt
gaggatgaggtgttgaagataaggaaagatgtggagatgcacaacttggccaagacctac
ttaactgagctcatcaaggaggagtgctggaactccatggttgtgaagggccgggctcta
aagtgttttcatataccctacgtggttgacaactttcccatgaaagagcgcacggaagag
gagctgctggaattgagtaaagttatggagcaaaggaagattgagatagagtgtctaaag
ctccggagggaaattgtagaggtccagtctacagccagtatgattaaaaagcatcatgag
gaggatgaggaagaagaggatgaagaaaaggtagtaaaaactaccagtctgcccaattac
ctgcttggtagtttgagcactgatttcggggcagacacatctttgttgacaaaccaattg
caacttcattccagagaggagaaaatcaaccaaatcatattgctaaaagatatcatttac
aatataaaaaagactttcaattgtgaatttgatgctgcctataagcaaaaagagattgaa
attgcacgcgtaaaagaaaagaatgttagaattgcagaaattatttcagacctggaattg
gatgaaactgtctggcaaccagtgtttgaagacagcgagatgccagaaagagcccttgtt
gtggaagatgatgaggtttcatttaaaaaatacattcctccatggcaaaaagacaaatca
gaagtgaccctatcctatggacaggagcgactgcggcaagcacggatctctgatgcaaga
cagagaggtctgatggatatgatgggaggtgttctggaagtcaagaaggaagacatctta
agaatggtgatccctcaacctcctttcatggcaaaacccgatgctctgtggagtgaagat
gaaaggaagcagttcaaagagtacgagaaaaaagtcaaggagctgaatgaagagagagac
aagtacagaaagtctttagaagcggagctgaagaaacttcaaaattctatccaagagaac
acacagaactttgatgagcatctgaagagactctttgaaaggagagtgaaggcagagatg
gtcatcaaccaggaggaactgaaaataaacaacattgtgtattctttgctgctggacgaa
gaactcagctccagggagcagttcctgaacaactaccttttgaagaaacaggaggagaaa
accaagacatcagaagccatccagaaagcgagagaagatctggacgtgttcaaggagcac
cacgacttcttagtggctgaagacaaaattctggatcgcagcttcaaaaaggaattttct
gagatttctggtcaccaggtggacatcctctacaagctttttaaacgccggccaagggtt
cacaaacagaaaacacaagcagatgtgaccactctcgttccttatggagatcgaccagga
tctgtcaagttaaataaggaaaactttgcccagctaatgaaatccatggatgaattggac
aatatcaataacatgccagaaggcttggacccctctgtctgggaacgtttctgcgcaact
agacgagcaaaagtggaaaacgaatacaaagtgaagcagaaggcagcttgcctactggaa
atgacgatgtttctccggaagcggatggaagatgatgaagctgtgcatcaagagattgag
agagtgttccatgagctcgtccgattacaggaggagaaagtgagattccaggtgaatttg
acagtacaaattcttcttaaacaaggacaaatagaactggagaatttccagttgattctg
gaatattccgatgcaattctcatcaataagaatataattgaagacttgaattctgtgatt
cggactcaaggacaaaagaaagttgctagcatgatggaaagtaaagacgtccacaaagga
atatatcagatcgagtgggagcacaagaaaatggagatggagatggaggacctaaaccag
agggcctgggacatccagatgctcttcttctcacgagatcggcagaagtacctaaatgag
ccaaactacgagaatgtgattgccattcagattggaataatggagcaaacaattggtgtt
atagataagaatcacaagaagaatgtagaaaactgcaaaaaactactcaagaaattggga
agatacagcaatcagaaagatgttgccaattttaccctaagctgtaacctcagggaagaa
ctggtggctgtctcagagagacaagacatttgcaatgaaataggatctaagctgacctgt
gagaagattgctaaagaacgctacgacaacctgatgaaacagcagaagctgacacacatc
tccaagcagcaagctgagcagatttcaatactgcaggctgaagtggataggctgaggatg
aaaacatttcctgctctcatcccaatgtaa
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integrated database retrieval system
