Mastomys coucha (southern multimammate mouse): 116104019
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Entry
116104019 CDS
T07224
Symbol
Vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116104019 (Vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116104019 (Vti1a)
Membrane trafficking [BR:
mcoc04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
116104019 (Vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
Peptidase_S46
Mer2
DUF5344
FapA
HAAS
Motif
Other DBs
NCBI-GeneID:
116104019
NCBI-ProteinID:
XP_031246576
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQLIKLRE
ERAHLLENTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRILTGMLRRRLLVAMHLKRLVHPIDVGNSDPLKVAHSVLITLIPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgacttcgaagggtacgagcaggacttcgcggtgctcactgctgagatcacc
agcaagattgccagggtccctcggctccctcccgatgagaagaagcaaatggttgccaat
gtggagaaacagcttgaagaggccagagaactgcttgaacagatggatttagaagttcga
gaaattccaccccaaagtcgaggaatgtacagcaacagaatgagaagctacaagcaagag
atggggaaactggaaacggattttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgctgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctggagaacacagagaggctggaaaggtcgtctcggagactagag
gctggataccagatagcagtggagaccgagcaaatcggccaagagatgttggaaaacctg
agtcacgacagagaaaagatacagcgggcacgtgaacggcttcgggaaacagatgcaaac
ttggggaagagctcccggattctgacggggatgttgcgaaggagacttctagtggccatg
cacttaaaacgcttggtacatccaatagatgttggcaactcagaccctcttaaagtagca
catagtgtcctgatcaccctgattcctgtttga
DBGET
integrated database retrieval system
