Mastomys coucha (southern multimammate mouse): 116104031
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Entry
116104031 CDS
T07224
Symbol
Tdrd1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116104031 (Tdrd1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116104031 (Tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Motif
Other DBs
NCBI-GeneID:
116104031
NCBI-ProteinID:
XP_031246653
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MMPRNNLEASTCKMAEPFNFEKKENKLPADDSLRSPGVQHNHPNFRLKSPENGNKKNNFL
LCEQNKQYLASQEDNSVVSSNPAVVNGEVGGSKGDRKTVPTGNPVSPLSLGNNSLPNPVK
TKPSNNVTPEKPKKSHKLFENALSVNNPALFNSLGPPLRSTTCHRCGLFGSLRCSQCKQT
YYCSTACQRRDWSSHSTVCRPVQQSLHKLEDNKSPFETKIIEVKNEQVDCPPGVTKEMTV
GAERVMFSDLRSLQLKKSMEIKGTVTEFKHPSNFYVQLYSSEVLEYMNQLSVSLKETYAN
VAPEDGYLPVKGEVCVAKYTVDQTWNRALIQGVDVLQKKACVLYIDYGNEEIIPIDRIHQ
LSRGIDLFPPSAIKCCVSGVIPTTGEWGEDCVAAVKALLLEQFCSIKVMDILEEELLTCA
VSIVLQSSGKHLDHVLVEMGYGMKTDEQNSKKQSMDQSASEDIGRLTAENKMVTDRNALI
PKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGHKLAELQESLSEYCGHVTPRSDFYPTI
GDVCCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLKRLCPIIPKLLDLPMQA
LNCVLAGVKPSLGIWTPEAICVMKKIVQNRMVTVRVVGMLGTRALVELVDESVAPPLSTS
KALLDSGFAIEEKDTGADKDVSVHTASVPSATEGPAEALEWTWVEFTVDETVDVMVCMMY
SPGEFYCHFLKDDALKKLDDLNKSLADYCAQRPHGGFKAELGRPCCAFFAGDGNWYRALV
KEILPSGNVKVHFVDYGNVEEVTTDQLQAISPQFLLLPFQGMQCWLVDIQPKNKHWTKEA
TARFQACVVGLKLQARVVEITENGVGVELTDLSTPYPKIISDILITEHLVLRCGSPQASL
MSRPANKHNQIDSHRVQASSSAEQWKTIELPVNKTVPANVLEIMSPTLFYAIPSEMPENQ
EKLCMLTAELLEHCSTQKGQMSYRPQTGDACCAKYTNDDFWYRAIVLETSDSEVKVLYAD
YGNIETLPLSRVQPIAATYLELPFQIIRCSLEGLTELNGSCSQLVVELLRTAMLSQRVLL
SVKAISKNIHTVSVEKCSENGMINIAENLVMCGLAENLTSKRTSASTKETSHSAECCCTE
LQKQIEKHEQILLFLLNNPTNQNKFIEMKKLLKS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgatgccacgaaataatttggaagcctctacttgtaaaatggcagagccatttaatttt
gagaaaaaggaaaacaagcttccagccgacgattctctgagaagtcccggagttcagcat
aaccatcccaatttcagactgaaaagcccagagaacggaaataaaaagaacaattttttg
ctttgtgaacaaaacaaacagtatttagctagtcaggaagacaattcggtggtctcttca
aaccctgctgttgtcaatggagaagtaggtgggtccaaaggagacaggaagactgtacca
acaggaaacccagtgtcaccattaagtcttggaaacaattcactacctaatccagtaaaa
accaaacccagcaataatgtgactcctgaaaaaccaaaaaagtctcacaagttgtttgag
aatgccttgtcggtaaataatccagcactcttcaactctttaggaccaccccttcggtca
acaacctgccaccgctgtggcctctttgggtcattgaggtgctcccagtgcaagcagacg
tactactgctccacagcgtgccagaggagagactggtcttcccacagcaccgtctgtagg
cctgtacagcaaagtttgcacaagcttgaagataataaatcaccatttgaaacaaagatc
attgaagtgaagaatgagcaggttgattgtcccccgggagttactaaagaaatgacagtt
ggtgctgagagagtaatgttctctgatttgagaagtctccaactcaagaaatccatggaa
ataaagggtacagttactgaattcaagcacccgagtaacttttatgtccagttatattct
tcggaggttctagagtacatgaaccagctctctgtaagcttgaaagagacatatgcaaac
gtggcacctgaagatggttatcttcctgttaagggggaagtttgtgttgccaaatacaca
gttgatcagacctggaacagagctctgatacaaggtgttgatgtgctgcagaagaaggca
tgcgtcttgtacattgactatggaaatgaagagatcattccaatagacagaattcaccag
ctaagcagaggcattgatttgttccctccttccgccatcaagtgctgtgtgtcaggtgtc
atccccaccacgggcgagtggggtgaagactgtgtcgcagccgtcaaggccctgctgttg
gagcagttctgctcaatcaaggtcatggacatcttagaggaggagttgctcacctgtgcc
gtcagcattgtgctacagagttcaggaaaacatctggaccatgtgcttgtggaaatggga
tatggtatgaaaacagatgagcagaactccaagaagcaaagtatggaccaaagtgcatcg
gaggatattggaagactcacagctgagaacaagatggtgacagacagaaatgccctgatc
cccaaagtgctgactttgaatgtgggtgacgagttttgtggcgttgttgcccacatccag
acaccagaggacttcttttgtcagcagctgcagagcggccacaagcttgctgagctccag
gaatccctcagtgaatactgtggccatgtgactccacgctctgacttttatccaaccatt
ggggatgtgtgttgtgctcagttctcagaggatgatcagtggtaccgtgcttcggttctg
gcctacgcttctgaagaatctgtcctggttggatatgtcgattatggaaactttgagatt
cttagtttgaaaagactttgtcccataattccaaagttgttggatttgccgatgcaagct
ctaaattgtgtgctggcaggagtgaagccatcattaggaatttggactccagaagctatt
tgtgtcatgaaaaagattgtacagaacagaatggtcacagtgagagtggtgggcatgctg
ggcaccagggccctggtggaacttgtagacgagtcggtggctcctccactcagcacttcg
aaagcgctcctagactcaggctttgccattgaggaaaaggacacaggggcagataaagac
gtcagtgtgcacaccgccagcgttccctcggccacagaaggaccagcagaagctttggag
tggacatgggttgagttcactgttgacgagacagtggatgtgatggtctgcatgatgtac
agccccggggagttctattgccactttcttaaagatgacgccttgaagaagctggatgac
ctgaataagtccttagcagactactgtgcacagaggccgcacggtggcttcaaggcagag
ctagggcggccttgctgtgccttctttgcaggtgacggcaactggtaccgggctctagtc
aaagagatcttaccaagtggaaatgttaaagtgcactttgtggattacggaaatgttgaa
gaagttaccacagaccaactccaggcaatatcaccacaattcttactgcttccatttcag
gggatgcagtgttggctagtagatatacagcccaaaaacaagcattggacaaaagaagcc
acagcaagatttcaagcatgtgttgtggggctcaaactccaagccagagttgtggaaatc
accgagaacggggtgggcgttgagctcactgatctgtccactccatatcccaaaatcatt
agtgatattctcatcacagaacatttggtcctgagatgtggttcaccacaggcctcattg
atgagcagacctgctaataaacataaccagatcgacagccacagggttcaagccagctct
tcagcagagcagtggaagacgatagaattaccagttaacaagactgtaccagcaaatgta
ctagaaatcatgagcccaaccttgttttatgccatccccagtgaaatgccagaaaaccaa
gaaaaactgtgcatgttaacagctgaactgttagaacactgtagcactcagaaaggccag
atgtcctacagaccacagacaggagatgcgtgctgtgctaagtatacaaatgatgacttc
tggtaccgggccattgttctggaaacttcagactctgaagtgaaagttctctatgcagat
tatggaaacatcgaaacactgcctctttccagagtgcagcccatcgcagccacctacctg
gagctgcccttccagatcattagatgctcacttgaggggctgacggagctgaatggaagc
tgttcgcagctcgtagtggagctgctgaggactgccatgctgagccagagagtgcttctc
tctgtgaaagcgatttcaaagaacatccacacagtgtcagttgaaaaatgttctgagaat
ggaatgatcaacatagctgagaatctggtgatgtgtggtctggcagaaaacctcacatct
aaaaggacaagtgcttccactaaagagacatcacacagcgcagagtgctgctgcacggag
ttacagaagcagattgagaaacacgaacagattctcctcttcctcttaaacaatccaacc
aaccaaaataaatttatagagatgaaaaagctgctgaaaagctga
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