Mastomys coucha (southern multimammate mouse): 116104498
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Entry
116104498 CDS
T07224
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116104498 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116104498 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116104498 (Nup54)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116104498 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
116104498
NCBI-ProteinID:
XP_031246879
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MAFNFGAPSGTSGTSTATAAPAGFGGLETANSTASGFNFGGFGLTANPAVSFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTG
FGTTTGTGTGLGTGLGAGLGFGGFNTQQPQQQQPSLGGLFSQPTQAPAQSNQLINTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNN
KDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYV
VERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGV
DPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKN
QTTTMAKIAQYKRKLMDLSHRALQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNAP
TQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHLISIIKDD
LEDIKLVEHGLSETIHSRGGVFS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaatttcggggctccttcgggcacttcgggcacctcgacagccaccgcggca
ccggcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaaccgctaaccctgcagtgagctttaatattgggaatttcggtgtttct
accacctcggcgactccgttcaattttggtaacagtctggcgagtgcaggtgggtttgga
ggatttggaacaacaactacaactgcaggctctgcattcagcttttctgccccaacaaac
acaggcagtacaggccttctcggtggcactcagaacaaaggtttcggctttggtactggt
tttggcacaacgacgggaactggaactggtttaggcactggtttgggagccggacttgga
tttggaggatttaatacccagcagccccagcagcagcagccttctttaggtggtctcttc
agtcagcctacacaggctcctgcacagtccaaccagctcatcaacactgccagcgccctt
tctgctccaacgctattgggcgatgagagagatgccatcttggcgaagtggaaccagttg
caggccttctggggaacaggaaaaggatatttcaataataacattcctccagtggagttt
acacaggaaaatcccttttgccgatttaaggctgtaggttatagttgtatgcccaataat
aaagatgaagatggactagtagttttaattttcaacaaaaaagaaacagatattagaagc
caacagcagcaattggtggaatcattgcataaagttttgggaggaaaccagacccttact
gtcaatgtggaaggcattaagactctgccggatgaccagacagaagttgtcatttatgtt
gttgagcgttctccaaatggcacctcgagaagagttccagcaacaacactgtatgcccac
tttgagcaagccaacattaaaacacagctgcagcagctcggggtgaccctttctatgacc
aggacagagctgtctcctgctcagatcaagcagctcttacagaaccctcctgctggtgtt
gatcctattatctgggaacaggccaaggtggataacccggattctgaaaagttaattcct
gtaccaatggtgggtttcaaagaattgcttcgaagactgaaggttcaagatcagatgact
aagcagcatcagaccagactagatatcatatctgaagatattagtgaactgcagaagaat
caaactacaactatggccaaaatagcacagtacaagaggaaactgatggatctctcccac
agagccttacaggtcctaatcaaacaggaaatccaaaggaagagcggctatgcgatccag
gctgatgaagagcagttgcgggttcagctagatactattcaaggggaactgaatgcacct
actcagttcaaaggtcgactgaatgaactgatgtcccagatcaggatgcagaatcacttt
ggagctgtgaaatctgaagaaaagtattacatagatgcagacctattacgagaaatcaag
caacatttgaaacaacagcaggaaggccttagccacttgattagcatcataaaagatgac
ctagaagacataaaactggtagaacatggattgagtgagaccatccatagcagaggcggt
gtctttagctga
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