KEGG   Mastomys coucha (southern multimammate mouse): 116104498
Entry
116104498         CDS       T07224                                 
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013  Nucleocytoplasmic transport
mcoc05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116104498 (Nup54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    116104498 (Nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116104498 (Nup54)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116104498 (Nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 116104498
NCBI-ProteinID: XP_031246879
LinkDB
Position
Unknown
AA seq 563 aa
MAFNFGAPSGTSGTSTATAAPAGFGGLETANSTASGFNFGGFGLTANPAVSFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTG
FGTTTGTGTGLGTGLGAGLGFGGFNTQQPQQQQPSLGGLFSQPTQAPAQSNQLINTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNN
KDEDGLVVLIFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYV
VERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGV
DPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKN
QTTTMAKIAQYKRKLMDLSHRALQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNAP
TQFKGRLNELMSQIRMQNHFGAVKSEEKYYIDADLLREIKQHLKQQQEGLSHLISIIKDD
LEDIKLVEHGLSETIHSRGGVFS
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggctttcaatttcggggctccttcgggcacttcgggcacctcgacagccaccgcggca
ccggcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaaccgctaaccctgcagtgagctttaatattgggaatttcggtgtttct
accacctcggcgactccgttcaattttggtaacagtctggcgagtgcaggtgggtttgga
ggatttggaacaacaactacaactgcaggctctgcattcagcttttctgccccaacaaac
acaggcagtacaggccttctcggtggcactcagaacaaaggtttcggctttggtactggt
tttggcacaacgacgggaactggaactggtttaggcactggtttgggagccggacttgga
tttggaggatttaatacccagcagccccagcagcagcagccttctttaggtggtctcttc
agtcagcctacacaggctcctgcacagtccaaccagctcatcaacactgccagcgccctt
tctgctccaacgctattgggcgatgagagagatgccatcttggcgaagtggaaccagttg
caggccttctggggaacaggaaaaggatatttcaataataacattcctccagtggagttt
acacaggaaaatcccttttgccgatttaaggctgtaggttatagttgtatgcccaataat
aaagatgaagatggactagtagttttaattttcaacaaaaaagaaacagatattagaagc
caacagcagcaattggtggaatcattgcataaagttttgggaggaaaccagacccttact
gtcaatgtggaaggcattaagactctgccggatgaccagacagaagttgtcatttatgtt
gttgagcgttctccaaatggcacctcgagaagagttccagcaacaacactgtatgcccac
tttgagcaagccaacattaaaacacagctgcagcagctcggggtgaccctttctatgacc
aggacagagctgtctcctgctcagatcaagcagctcttacagaaccctcctgctggtgtt
gatcctattatctgggaacaggccaaggtggataacccggattctgaaaagttaattcct
gtaccaatggtgggtttcaaagaattgcttcgaagactgaaggttcaagatcagatgact
aagcagcatcagaccagactagatatcatatctgaagatattagtgaactgcagaagaat
caaactacaactatggccaaaatagcacagtacaagaggaaactgatggatctctcccac
agagccttacaggtcctaatcaaacaggaaatccaaaggaagagcggctatgcgatccag
gctgatgaagagcagttgcgggttcagctagatactattcaaggggaactgaatgcacct
actcagttcaaaggtcgactgaatgaactgatgtcccagatcaggatgcagaatcacttt
ggagctgtgaaatctgaagaaaagtattacatagatgcagacctattacgagaaatcaag
caacatttgaaacaacagcaggaaggccttagccacttgattagcatcataaaagatgac
ctagaagacataaaactggtagaacatggattgagtgagaccatccatagcagaggcggt
gtctttagctga

DBGET integrated database retrieval system