Mastomys coucha (southern multimammate mouse): 116104670
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Entry
116104670 CDS
T07224
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116104670
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116104670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116104670
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116104670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
116104670
NCBI-ProteinID:
XP_031247023
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MSPAAPAAAAADGGERRRPPLGVREGRSRARGCGGPAGAAALGLALLGLALYLVPAAAAL
AWLAVGASAAWWGLSREPRGPRGLSSFVRESRRHPRPALTASPPLAKSPVNGSLCEPRSP
LGGPDPAELLLMGSYLGKPGPPEPALPQDPRERPGRRPPSRSPPPATAVQRVHHVYPALP
TPLLRPARRPPHRDCGPLSSRFVITPRRRYPIQQAQYSLLGALPTVCWNGGHKKAVLSAR
NSRMVCSPVTVRIAPPDSKLFRSPMPEQILDTSLSPPSSSAPDPCAKETVLNALKEKKRR
TVAEEDQLHLDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDD
HLNKRSRTSSVSSLTSTCTGGIPSSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASS
RSQTPERPAKKTREEEPCQQSSSSAPSVTDKESPGEKVTDAAAGKQQSLWTSPPTPGSSG
QRKRKIQLLPTRRGDQLTLPPPPELGYPITAEDLDMERKASLQWFNTVLEDKPDDASTSA
TDNPPASSSPFTFTLPAVGPAASPASLPAPSSNPLLESLKKMQESPAPSSSEPAEAATIA
APSPPKTPSLLAPLVSPPTGPLASTSSDSKPTATFLGLTSASSTTPLTDTKSSGVSQAEQ
SVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPGPACASPMFKPIFPATPKSESNSPL
PTSSSAATTASSSTATPTAASTAAPTFKPIFDKQEPFTAMPLSTPFSLKQTTATATTTAT
SAPLFTGLGTATSTVASGTTASASKPVFGFGVTTAASTASTALTPTPQSLLLGGAPPVTA
SSSTPALPSIFQFGKPLAPAASAAGASFSQPLASSAQTAASSSSGGFSGFGSTLTTSTSA
PATQSSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGIGTAGSSLSFGASSTPTQGFVG
VGPFGSAAPSFSIGAGSKTPGARQRLQARRQHTRKK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctccggcggctgcggcggctgacggaggcgagcggcggcggcccccg
ttgggcgtacgggaaggccggagccgggcccgcggctgcggaggaccggcgggtgctgcg
gctctcggcctagcgctgctcggcctcgcgctctacctagtgcccgcggcggccgcgctg
gcctggctggccgtgggggcgagcgcggcctggtggggcctgagccgagaaccccgcggc
ccgaggggcctgtcgtcgttcgtgcgcgaatcgcgccgtcacccgcggcccgcgctcacc
gcttcaccgcctctagccaagtcgccagtcaacggtagcctctgcgaaccccgcagcccg
cttggaggccccgaccccgctgagctcttactcatgggcagctacctgggcaagccaggc
ccgcccgagcctgctctcccgcaggacccaagggagaggccggggcgccgcccaccctca
cgctccccgccgccggcaaccgcggtccagcgagtccaccacgtctaccctgcgctcccc
accccacttttgcgacccgcccggaggccgccccaccgagattgtgggcctttatccagt
cggtttgttataacacctcgaagacgatatcccattcagcaagcccagtattccttgctt
ggggcacttccaaccgtctgctggaatggtggtcataagaaggctgtgctgtctgcacgg
aactccaggatggtgtgcagcccagtgacagtgaggattgcccctccagacagcaagctg
ttccgctcaccaatgcccgagcagatacttgacacatcattgtccccaccatcaagtagt
gccccagacccgtgtgcaaaagagactgtcctgaatgccctcaaggaaaagaagaggagg
acagtggcagaggaagaccagctgcaccttgacggccaggaaaacaagaggaggcgccat
gatagcggtgggagcggacattcagcatttgagcctcttgtggccaacggagtccctgct
gcatttgtgcctaagcctggctccctgaaaagaagtctggcttcccagagctcagatgac
cacttgaacaaacggtctcgcacctcctctgtgagctccctgactagtacatgcacagga
ggtatccccagctctagccgcaacgccatcaccagctcctacagctccacccgtggcatc
tcacagctgtggaagaggagtggtcccacgtcttctcccttctccagcccagcttcctcc
cgctcccagacgccagagaggccagccaagaagacaagagaggaggagccatgtcagcag
tccagttcttcagctccctcggtgacagacaaggagtccccaggagaaaaggttacagat
gcagccgctgggaagcagcagagcttatggacttccccacccacacctggcagctctggg
caacgcaaacggaagattcagttgctgcccacccggcgaggggaccagctcaccttgcct
ccaccccctgagctcggctatcccatcactgctgaagacctggacatggagaggaaggcc
tcactgcagtggtttaacacggtcttggaggacaagccggacgatgcttccacctcagcc
actgacaacccccccgcctccagctctcccttcacattcaccctgcctgctgtggggcct
gccgcctcaccagcctccctcccagctcccagctccaacccactgttggagagcttgaag
aagatgcaggagtctccagccccatcgtcctcggaacctgctgaggcagcaacaattgca
gctccttcacctccaaagacacccagcctcctggctcctcttgtctcaccaccgacaggg
cctttagccagcacctcctcagactccaaacctacagccaccttcctggggctgacttct
gcttcctctacaacaccactcactgacaccaagtcctctggagtctctcaggctgagcag
tctgtcagcaccccagcctccacagcttcctccccaactccaaaacccagcatgctgttt
gggatgctgagtccacctgccagctcttcctcccttgccactcctggtccagcttgtgct
tctcccatgtttaaacccattttcccagccacacctaaaagtgagagtaatagccccttg
ccaactagctcctcagccgccactacagcttcatctagcaccgccacccccacagcagcc
agcaccgcagctcccactttcaagcccatttttgacaagcaggagccatttacagccatg
cccctgtcaactcccttctccctgaagcagacaactgctacagccaccactacggccaca
tcagctcctcttttcaccggtctaggcactgccacctccacggtggcctctggtaccaca
gcttctgcctcaaagcctgtgtttggctttggagtgaccaccgcagcaagcacggccagt
actgccctgactcccaccccccagtcccttctgctcgggggggccccccctgttactgct
tccagctccaccccagccctgccctccatcttccagtttggcaagccccttgccccagca
gcatctgcagcaggagcctcctttagccagccccttgccagctctgcccagactgctgcc
agcagtagcagtggtggcttcagtggttttggcagcaccctcaccacctccacctcggcc
cctgccacccagagctcacccttcgccttcagtgtgggcagtacacctgaaagcaagcct
gtgtttggaggcacatccacacctacttttgggcagagtgcccctgccccaggcataggc
acagcagggagcagcctctcatttggggcctcttcaacacctacccaaggctttgttgga
gttggaccttttggatcagcagccccttcattttccattggcgcgggatccaagacccca
ggggctcgacagcgacttcaggcccgaaggcagcacacccgcaagaagtag
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