Mastomys coucha (southern multimammate mouse): 116104718
Help
Entry
116104718 CDS
T07224
Symbol
Pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116104718 (Pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116104718 (Pan3)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116104718 (Pan3)
mRNA degradation factors
3'-5' decay
Pan complex
116104718 (Pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
116104718
NCBI-ProteinID:
XP_031247063
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MNSGGGLPPPSAAASPSSSSLAAAVAVAVAASSGVGGVPGGPAAGVKLKYCRYYAKDKTC
FYGEECQFLHEDPASGAAPGLGLHSNSVPLALAAASGAGFPPGALPGGGAGPPAGPKKPE
LGVPGAATAGGGLDGPRVAIPGMDGGALTDTSLTESYFSTSFIGVNGFGSPVETKYPLMQ
RMTSSSSSPSLLNDSAKPYTGHDLLTSSASSLFNDFGALNISQRRKPRKYRLGMLEERLV
PMGSKARKAKNPNGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLS
NVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTP
NPASFMVPPSASTPANNPVPQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMKSEHGQMI
KVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTE
VDSYHSLFPLEPLPPMMSRHFNDPNSDAYFTKRKWGQHDGPLPRQHAGLLPESLIWKLKV
MFIFSCQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQ
NRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEF
QKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRD
EKSVLVVTYSDLKRCFENTFQELIAAANGNDRNSN
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggccttccgcccccctcggccgctgcctccccgtcgtcctcctcg
ctggcggcggccgtggcggtcgcggtcgcggcctcgtccggcgtcgggggcgtccccggc
gggccggctgcgggtgtgaagctcaagtactgccgctactacgccaaggacaagacgtgc
ttctacggagaggagtgtcagttcctgcacgaggacccagcctccggcgcggccccgggg
ctgggcctccatagcaacagcgtcccgctggcgctagcggccgcgtcgggggccggcttt
cctcccggagcgctcccgggcgggggagcggggccgcccgcggggcccaagaagccggag
ctgggcgtcccgggggcggcgacagcgggaggcggactcgatggaccgcgggtggcgatt
cccggaatggatggaggtgctttaactgacacaagtctcacagagtcctatttcagcacc
agctttattggagtcaatggatttggaagccctgtagaaacaaagtatcccttgatgcag
agaatgactagtagtagcagctccccaagccttctaaatgacagtgccaagccatacaca
ggccacgatcttctgacttcatctgcttcatccttgtttaatgacttcggtgccctcaac
atctcccagagaaggaagccaaggaagtatcgcctggggatgctggaggagaggctagtt
ccgatgggatcaaaggcacgaaaagcaaagaaccctaatggctgccttgctgacaggtgt
aaatcaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacag
acaccaaatcctactgcaagcgaatttatacctaaaggaggatcaacctccaggctgagt
aacgtgtcccagtcaaatatgtctgccttctctcaagttttctctcacccatccatggga
agtcctgctactgctggattagcaccaggaatgtcattgtctgctggatcttcccctctc
cattctcccaaaattactccacacacctctcctgctcctagaagaagaagccacactcca
aacccagcgagtttcatggtgccgcctagtgcctccactcctgccaataaccctgttcct
cagactccatcctctggtcaggtgatccagaaggagactgtcggggggacgacttacttc
tatacagatacaactccagcacctttgactggaatgaagagtgaacatggccagatgatc
aaggtatttccaaactatcatatttatcctccaaccgcacctcatgttgcttatatgcaa
ccaaaagcaaatgcaccttccttctttatggccgacgagctccgacaggagctgatcaac
agacatttaataacaatggctcaaattgatcaagcagatatgccagcagtccccacagaa
gttgacagctaccatagcctgttccctctagaaccactgccacctatgatgagcagacac
tttaatgacccaaattctgatgcctacttcacaaagagaaagtggggccagcatgatgga
ccactacccaggcagcatgctggattgttaccagagtctctcatctggaaattaaaagtt
atgtttattttctcatgtcagcaagcagatctgatatcattaggaaaagttgtgttggct
ttggcttgcaactctttggcaggaattcagcgagaaaatttacagaaagccatggaattg
gtgacaatcaactactcctctgacctgaagaacctcatcttgtacttgttgactgaccaa
aacagaatgcggagtgtgaatgacatcatgcctatgattggtgctcggttttacactcaa
ttggatgctgctcaaatgagaaatgatgttattgaggaagaccttgctaaggaggttcaa
aatggaagactgtttaggcttctagcaaaattgggaacaatcaacgagaggccggagttt
cagaaggatccaacctggtcagaaactggagaccgatacctattgaaactctttagggat
catctttttcatcaggtaacagaagcaggtgctccctggatcgacctcagtcacatcatt
tcttgtcttaacaagctagatgctggtgtgccagaaaaaataagcctgatttccagggac
gagaagagcgtgctggtggtgacatacagtgacctaaaacgctgctttgaaaataccttt
caagaactgattgcggctgcaaatggtaacgatcggaacagtaactga
DBGET
integrated database retrieval system
