Mastomys coucha (southern multimammate mouse): 116104801
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Entry
116104801 CDS
T07224
Symbol
Nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X3
KO
K14571
ribosome biogenesis ATPase
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116104801 (Nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116104801 (Nvl)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116104801 (Nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
TIP49
AAA_2
AAA_33
nSTAND3
AAA_28
RNA_helicase
NPHP3_N
AAA_18
Mg_chelatase
AAA_17
ABC_tran
NACHT
Zeta_toxin
TsaE
Rad17
NB-ARC
IstB_IS21
AAA_3
Viral_helicase1
ATPase
Vps4_C
nSTAND_NTPase5
Parvo_NS1
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
116104801
NCBI-ProteinID:
XP_031192715
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MPLKTPAQGSEGGWFIDKTPGGKKESLPLDLSDDQSNYKKQDSEIQDSKDSSLLEGDKKR
KGGAKGKGNKRKTEDLQEVDGEIEAILQKKAKARSTELQISNVKFEDVGGNDATLKEVCK
MLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVS
GESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNLA
ATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNF
CHLAHLTPGFVGADLMALCREAAMCAVNRVLMKQQTQQKKKPETEGLPSEGDQEDRLGAE
PPSEAQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVT
WADIGALEDIRDELIMAILAPVRNPDQFRTLGLGSPAGILLAGPPGCGKTLLAKAVANES
GLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASV
RVVNQLLTEMDGLETRQHVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILK
TITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITGQKNGIGTG
ELKVSHKHFEEAFKKVKPSVSIKDQMMYEALQKSLSQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgccactgaaaacccctgcccaaggatctgagggaggatggtttattgacaaaacccca
ggcggaaagaaagaaagccttcccttggacctatcagatgaccaaagcaactataaaaag
caggactctgagattcaggattcaaaagactcttctcttctggaaggtgataagaaaagg
aaaggtggggcaaagggcaaaggaaacaagagaaaaacagaggatcttcaagaagtagat
ggagaaatagaagctattctgcaaaagaaagctaaagcaaggagtacagagttgcagatt
tccaatgtgaagtttgaagatgttggaggcaatgatgcaacattaaaagaagtctgcaag
atgctcatccacatgcgtcatccggaggtataccagcacctgggtgtcgtgccccctcgt
ggagtcctcctgcatggtccaccaggctgcgggaagaccttacttgcacatgcaatcgcg
ggggagcttgacttgccgattctgaaagtggctgccccggagatcgtgtcaggagtttct
ggagagtctgagcagaagctcagagatttgtttgaccaggctgtgtcaaatgcaccatgt
attgttttcattgatgaaattgatgcaattacccccaaaagagaagttgcttcaaaagat
atggaacgaagaattgtagctcagcttctaacctgcatggatgatctgaataacctggca
gctacagcccgggtcctcgttgttggagctactaaccggccagactcattggatcccgct
ttgagacgtgcaggaaggtttgaccgagaggtctgcttgggaatcccggatgaggcagcc
agagaaagaattctccaaacgttgtgccgaaaactgaggcttccagaaacttttaatttt
tgtcacttagcacacctaacgccaggctttgttggtgctgatctgatggccctttgccga
gaggcagccatgtgtgcggtcaatagggtcttgatgaaacagcagacgcagcagaagaaa
aagcctgagactgaaggcttgccctctgaaggagaccaggaggacaggctgggagctgag
cccccttctgaagctcaggatgaattgcaaaggctgttggggttgctaagagaccaagat
cccctctcagaggaacagatgcaaggactgtgcattgaattaaatgatttcattgttgct
ctggcagaagtccagccttctgccaaaagggaaggctttgtaactgtccctaatgtgaca
tgggctgatattggtgctctggaagatattagagacgagcttataatggcaatattggca
cctgtccgcaacccagaccagttccgaactcttggtttggggtctccagctggcatcctc
ctagccggtcctcctggatgtggaaaaactctgctagcaaaggctgtggcaaatgagtct
ggactaaattttatatctgtcaaaggccctgaattattgaatatgtatgttggtgagagt
gaacgtgcagtacgacaggtttttcagcgagccaagaactcggcaccctgcgtgatattt
tttgatgaagtggatgctttatgtcctcggagatcagaccgagaaacaggtgctagtgtt
cgcgtggtgaatcagctgcttaccgagatggatggtttagaaacacgccagcacgttttt
attttggctgccactaatagaccagatatcattgaccccgccattctgcgcccaggccgg
ctggacaaaacactcttcgtgggtttgccacctccagcagaccgtgttgccatattaaag
actattacaaaaaatggcaccaagcctccactggatgaagatgtaaatttggaaacaatt
gctaatgaccttcgctgtaattgctatacgggtgcagaccttactgctttagttcgagaa
gcttctctctgtgccctgagacaagaaataacaggacaaaagaatggaattggaacaggt
gagcttaaggtcagccataagcactttgaagaagctttcaagaaagtgaaaccatccgta
tcaataaaggatcaaatgatgtatgaagctctgcagaagtccctcagtcagtga
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