Mesoplasma coleopterae: MCOLE_v1c02250
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Entry
MCOLE_v1c02250 CDS
T05286
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mcol
Mesoplasma coleopterae
Pathway
mcol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCOLE_v1c02250 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcol03019
]
MCOLE_v1c02250 (rny)
Messenger RNA biogenesis [BR:
mcol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MCOLE_v1c02250 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
DUF948
DUF3278
DUF5440
Motif
Other DBs
NCBI-ProteinID:
ATZ20739
UniProt:
A0A2K8P1Y3
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All DBs
Position
249662..251173
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AA seq
503 aa
AA seq
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MGTIIGLIIVSVAFVVTLCSLLYILTSKSQKVLNAKKIKEAKNERKKILSDTYREINEQK
KLFEDKLQFEKNKLEIAKQNIENESNLLIKERTIINKQQETLDLKNIDLDKRIKDYSDRR
EELIKRLEVISNMTSFEAKAELMKNVESKIQYEIVSQIKQAENLAHSRAKEISNSIILSA
MERFKTDIVNEKTTNLVKLPNDDIKGWIIGKDGRNLKTFEQLAGVEIIIDDTPEVVTISS
FNPIRREIATKTLEKLLIDKRIQPIKIEKELKNQEILIDQTILEIGYQVMDELGIHDMDK
ELVKLVGKLKYRTSYGQNVLLHSVEVAKIASSIASELGLNAKQALRAGLLHDIGKAIDFE
KTGSHVFLGVEAARKYGEEDVIINSIEAHHEDVAKESEIAVIVAIADAISASKPGARNNS
IEDFIVRMKEIEKIGNKIPGISKTYAFQAGRQIRVIVDPVTTDDKDLAGILETLKNDLKN
SVIIPGEITITAIREKREILIFN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgggaactattataggactgataattgtttcagtagcctttgtagtaacactatgctca
ttgctttatatattgacttctaaatcacaaaaagtcttaaatgcaaaaaagattaaagaa
gctaaaaatgaaagaaaaaaaattctctcagacacatatagagaaataaatgaacaaaaa
aagttatttgaagataaacttcaatttgaaaaaaataaattagagatagctaaacaaaat
attgaaaatgaaagtaacttattaatcaaagaaagaactattattaataagcaacaagaa
actcttgatcttaaaaatatagacttagataaaagaataaaagattattctgatagaaga
gaagaacttattaaaagattagaagttataagtaatatgacaagttttgaagctaaagca
gagttgatgaaaaatgttgaatcaaaaattcaatacgaaatcgtgagtcaaataaaacaa
gcagaaaatttagctcattcaagagctaaagaaatatcaaatagtattatattatctgca
atggaaagatttaaaactgatattgttaatgaaaaaacaacaaatttagttaagcttcca
aacgatgatattaaaggttgaattattggtaaagacggtagaaaccttaaaacttttgaa
cagttagctggagttgaaataattatcgatgatacacctgaagttgttacaatttcgtca
tttaatccaattagaagagaaattgcaactaaaactttagaaaaattattaattgataaa
agaattcaaccaataaaaattgaaaaagaattaaaaaatcaggagatattaattgatcaa
acaattttagaaataggttatcaagtaatggacgaactgggtattcatgatatggataaa
gagttagttaaattagtaggtaaacttaaatatagaactagttatggtcaaaatgtttta
ctgcattctgttgaagttgcaaaaattgcatcaagtatcgcatctgaacttgggttaaat
gctaaacaagctttacgcgcaggattattacacgatattggtaaagcaatagattttgaa
aaaacaggaagtcatgtattcttaggcgttgaagcagcaagaaaatatggcgaagaagat
gtaattattaattcaatagaagctcatcatgaagacgtagctaaagaaagcgaaatagct
gttattgtagctattgctgatgctatcagtgcttcaaagcctggagctagaaataattca
attgaagatttcattgtaagaatgaaagaaattgaaaaaattggtaataagattccaggt
atatcaaaaacttatgctttccaagcaggaagacaaattagagttattgttgatccagta
acaactgatgataaagatcttgcaggaatattggaaactctaaaaaatgacttaaaaaat
agtgttattattccaggagaaataacaattacggctattagagaaaaaagagaaatctta
atatttaattaa
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