Mesoplasma coleopterae: MCOLE_v1c06230
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Entry
MCOLE_v1c06230 CDS
T05286
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mcol
Mesoplasma coleopterae
Pathway
mcol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCOLE_v1c06230 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcol03021
]
MCOLE_v1c06230 (rpoC)
03400 DNA repair and recombination proteins [BR:
mcol03400
]
MCOLE_v1c06230 (rpoC)
Enzymes [BR:
mcol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCOLE_v1c06230 (rpoC)
Transcription machinery [BR:
mcol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MCOLE_v1c06230 (rpoC)
DNA repair and recombination proteins [BR:
mcol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MCOLE_v1c06230 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
ATZ21134
UniProt:
A0A2K8P2Z4
LinkDB
All DBs
Position
complement(710351..714115)
Genome browser
AA seq
1254 aa
AA seq
DB search
MENKNNKVIKIELASADTIRSWSHGEVTKPETINYKTLKAEKDGLFDEKIFGPTKNYECF
CGKFKKANPMNKGKKCEKCGVELTESIVRRERMGHIELAEPVTHIWMVKVSPSRIASLLD
LKSKELEEVVYFVSHIVLDPGTSKHFAAKEVLDLGVSKSQKTRSKLRPAIEEIIALINDK
DHRDTLKAERLLEELNNPTIPFSIDEATALISKYTDAKFGIGASAIEELLKQIDLDKEIE
ITKNTLDAIGPNADNSKLLKRLDILESLKRSNQKPEWMVLRVLPVIPPDIRPIIQLDGGR
FTTSEINDLYRRIIIRNERLLKVKEMGAPSIIINNEKRMLQEAVDALLDNERKPRPIQGK
DKRPLKSLTSVLKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPREMALTLFKP
FVIQWLQEHEYAENVKVAEKMILQNDPKIWEALEHVIKDRPVLLNRAPTLHRLGIQAFEP
KLVKGKAIRLHPLVTTAFNADFDGDQMAVHVPITKEAVAEARALMLGSNAILGPKDGKAI
VTPGQDIILGNYYATFEEKNQLGEGTMFAEITEAINAFDTGNVSLNAIIGIAVDALPTEK
FNDEQRKGYLLTTVGKILFNQIFDNSFPWINSSSIYDAREAVNSFIFDFSKDINEAIAEY
TIVSPIKKKELSIIIEIYFNNFGARKTAEMLDKMKDLGFKYSTKSGTTISAGDVVAFKHK
YEEFAEADQKVAEITSFYNEGMLTKEEKKHRVIEVWSDVKDDIQKRLELVLKQDTKNPVF
VMADSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLSVSEYFVSTHGARKGM
ADLALKTADSGYLTRRLVDVSQEIVVVNEDCKANKGFEIEAVIDTKHNNVIVPLKDRIVG
RYSFNDIKDVKGNIVIAKDTLIESKEADAIVAAGITKVTIRSVLTCDNQKGVCQRCYGRN
LATASLVKIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVAGDADITQGLPRIKELLDVTTQ
KGSVAIIAEKAGVVTDIINKNGINTIIVTEEVNGTQIDKPYKTMYNAVLRVNKGDEVKPG
KKLTEGSINLHDLLEVAGTTAVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKVI
QSGESHLLQGEIVTQQKFKEVVTQCIREGKVPPVAKNQILGIKKAPLKSESWLSSASFQD
TARVLTDAIIKGREDKLEGLKENIMLGNLIPAGTGLTGIEEVMEIAEEYHKNEY
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaacaataaagtaattaaaattgaattggctagtgctgatactattcgt
tcatgatcacatggagaagtaactaagcctgaaacaattaactataaaacattaaaggct
gaaaaagatggtctatttgacgaaaaaatatttggaccaactaaaaactatgaatgtttt
tgtggaaaattcaaaaaagctaaccctatgaataaagggaaaaaatgtgaaaaatgtggt
gttgaattaactgaatcaatcgtgcgtcgtgaaagaatggggcacattgaattagcagaa
cctgttactcatatttgaatggttaaagtatctccatcaagaatcgcatcattattagac
ttaaaatctaaagaattagaagaagttgtttactttgtttctcacatcgttttagatcca
ggaacatcaaaacactttgcagctaaagaagttttagatttaggagtttcaaaatcacaa
aaaactcgtagcaaattaagacctgctattgaagaaattattgccttaattaatgataaa
gatcatagagatacattaaaagctgaaagattattagaagaattaaacaatccaactatt
ccattctcaattgatgaagctactgctttaatttcaaaatatactgatgctaaatttggt
attggtgcctctgcaattgaagaattattaaaacaaattgatttagataaagaaatcgaa
attacaaaaaatactttagatgctattggaccaaacgctgataattcaaaattattaaaa
agattagatattttggaatcattaaaacgttcaaatcaaaaaccagaatgaatggtgtta
cgcgtattaccagttattccaccagatattcgtcctattattcaattggatggaggaaga
tttacaacttctgaaattaacgatttataccgtcgtattattattagaaatgaacgttta
ctaaaagttaaagaaatgggtgcaccatcaattattattaacaacgaaaaacgtatgtta
caagaagctgttgatgcattattagataatgaacgtaagccacgtccaattcaaggaaaa
gacaaacgtccattgaaatcattaactagtgtacttaaagggaaacaaggacgtttccgt
caaaacttacttggaaaacgtgttgactactcaggtcgttcagttattgctattggacca
gacttaaaaatgtatcaagcaggaattcctcgtgaaatggccttaacattattcaaacca
tttgtaattcaatgattacaagaacatgaatatgctgaaaacgttaaagttgctgaaaaa
atgattttacaaaacgatccaaaaatttgagaagctttagaacacgttattaaagataga
ccagttttattaaaccgtgctcctactcttcacagacttggtattcaagcatttgaaccc
aaattagttaaagggaaagcaattcgtcttcacccacttgtaactactgcgtttaacgcc
gatttcgatggggaccaaatggctgttcacgttccaattacaaaagaagctgttgctgaa
gctagagctttaatgttaggatcaaacgctattttaggacctaaagatggaaaagcgatt
gttactccggggcaagatattattttaggtaactactatgctacttttgaagaaaaaaat
caattaggtgaaggaacaatgtttgctgaaattactgaagcaatcaatgcattcgacaca
ggaaatgtttcattaaacgcgattattggaattgctgttgatgcattaccaactgaaaaa
ttcaatgatgagcaaagaaaaggttatttattaacaacagttggtaaaatcttatttaac
caaatttttgataattcattcccatgaattaattcatcaagtatttatgatgcaagagaa
gctgtaaattcatttatctttgatttctcaaaagatattaatgaagccattgcagaatac
actattgtttctccaattaagaaaaaagaattatcaattattattgaaatttactttaac
aattttggagcaagaaaaactgctgaaatgctagataaaatgaaagatttaggatttaaa
tattcaacaaaatctggaacaactatttcagcaggtgacgttgttgcctttaaacataaa
tatgaagaatttgctgaggctgatcaaaaagttgcagaaattacaagtttctacaacgaa
gggatgttaactaaagaagagaaaaaacaccgtgttatcgaagtttgatctgatgttaaa
gatgacattcaaaaaagacttgaattagtattaaaacaagatactaaaaaccctgttttc
gtgatggcggattctggagcccgtggtaatgtttctaactttacacaacttgtaggtatg
cgtggacttatgaacgatactaaaggggatattaaagaaattccgattaaatcatcattc
cgtgaaggtttatcagtttctgaatatttcgtttctactcacggtgctcgtaaagggatg
gccgatttagccttaaaaactgccgattcaggttacttaactcgtcgtttagttgacgtt
tcacaagaaattgttgttgttaacgaagactgtaaagcaaacaaaggatttgaaattgaa
gcagttattgatacaaaacataataacgttattgttccattaaaagacagaatcgttgga
cgttactcattcaatgacattaaagatgttaaaggtaatattgtaattgctaaagatact
ttaattgaatcaaaagaagctgacgcaattgttgctgctggaattacaaaagtaacaatt
cgttcagtattaacttgtgataaccaaaaaggtgtttgtcaaagatgttatggacgtaac
ttggcaacagcatcattagttaaaattggagaacctgttggggttattgctgctcaatca
attggtgaaccaggaactcaacttacaatgcgtaccttccataccggaggggttgcaggg
gacgctgatattactcaaggtcttcctcgtattaaagaattacttgacgttacaactcaa
aaaggttcagttgctattattgctgaaaaagctggagttgttacagatattattaacaaa
aatgggattaatacaattattgttactgaagaagttaatggaacacaaattgataaacca
tacaaaacaatgtataacgctgtgttaagagttaataaaggtgatgaagttaaaccaggt
aagaaacttactgagggttcaattaacttacatgatctattagaagttgctggaactaca
gctgtacaaaactacatcttaaaagaagttcaaaaagtttaccgtttacaaggtattgaa
atttcagataaatatatcgaaattattgtaaaacaaatgttaaacaaagttaaagttatc
caaagtggtgaatctcatttactacaaggtgaaattgtaactcaacaaaaattcaaagaa
gtagttactcaatgtatccgtgaaggtaaagtacctccggttgctaaaaaccaaatttta
ggtattaaaaaagctccattgaaatcagaatcttgattatcatcagcttcattccaagat
actgcgcgtgtgttaacagacgctattattaaaggaagagaagataaattagaaggtctg
aaagaaaacattatgttaggaaatttaattcctgcaggaacaggtttaactggaattgaa
gaagtaatggaaattgctgaagaataccacaaaaacgaatactag
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