Mycoplasmopsis columbina: NCTC10178_00192
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Entry
NCTC10178_00192 CDS
T06777
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mcom
Mycoplasmopsis columbina
Pathway
mcom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10178_00192 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcom03021
]
NCTC10178_00192 (rpoA)
03400 DNA repair and recombination proteins [BR:
mcom03400
]
NCTC10178_00192 (rpoA)
Enzymes [BR:
mcom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10178_00192 (rpoA)
Transcription machinery [BR:
mcom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10178_00192 (rpoA)
DNA repair and recombination proteins [BR:
mcom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10178_00192 (rpoA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VEU76783
LinkDB
All DBs
Position
1:184502..185506
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AA seq
334 aa
AA seq
DB search
MEKMSKLAYEQIQSSNQNINKTTFSLKPLERGFANTLGVPLRRVLLSSITGLGLFAVKID
GVEHEFQTIPGVEEDVVRLILNLQKIKFQYDPNLVSDDDIIKVTLKPDTTAEITSRFLEV
KNSNIEIINKTEHIATVNKANALHLEMYLRPGRGFVSAEDNKKILNNNSLMSKVNSDIKR
GIFIATDSNFSPIEKVNYEVLQLNTSSLKIEEELKFHLETNGTIEPKLAIQQACEILVAH
FKLIGNVDEMKLDIFAEDKEIEVKEEDNDIDISQLQLSVRSTNALRRIGKTKLSEIADMT
LEELEQVKNLGKKSIEEIIAMLAENGRQLKKGEE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatgagtaaattggcttatgaacaaattcaaagttcaaaccaaaacattaac
aaaaccacttttagcctcaaaccgcttgaaagaggttttgctaatacattaggagttcca
ttacgtagagttttattatcaagcatcactggattaggcttatttgcagttaaaatcgat
ggtgttgaacatgaattccaaaccattccaggtgtggaagaagatgttgtaagattaatt
ttaaacctacaaaaaattaaattccaatatgacccaaacttagtttcagatgatgacatt
attaaagtaactttaaaaccagatactacagcagaaattacttcacgtttcttagaagta
aaaaattctaacattgaaatcatcaacaaaacagaacatattgccactgtaaataaagca
aatgccttacacttagaaatgtatcttcgtccaggtagaggttttgtttcagctgaagac
aataaaaaaattcttaacaataattcattaatgtcaaaagtaaatagtgacattaaaaga
ggtatttttatcgcaacagattcaaacttctcaccaattgaaaaagtaaattatgaagtt
ttacaattaaacacttcaagtttaaaaattgaagaagaattaaaattccatttagaaact
aacggaactattgaacctaaacttgcaattcaacaagcttgtgaaattttagtagctcac
tttaaattaattggaaatgttgatgagatgaaattagacatttttgcagaagataaagaa
attgaagtaaaagaagaagataatgacatcgatattagtcagttacaattatcagtgcgt
tcaactaatgctcttagaagaattggcaaaactaaattatctgaaattgctgatatgaca
cttgaagaacttgaacaagttaaaaacttgggtaaaaaatcaattgaggaaattatcgct
atgttagccgaaaacggccgtcaacttaaaaaaggagaagaataa
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